G5768


Basic Information

Item Value
gene id G5768
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 33892474 ~ 33893143 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7098
TAGGGGCAAAGAATACAGATGTTGCCGACTTCAAAACGAAGAACGTTTTTGATGATAAGccggaggaggaagagggagatggTTTTGATTTCTTTGGTAAGGATGAGGTCTCTCCTGCTGAAGAGACACGTCGCCGGCGACCTGCCAAACCAGTAAAGCCTCACAAGCCCCCGGACGATGAAGAGGAGGTTGAGGAAACCCTGGATCCACTGGGAATTCTCAACAGTGTTGCTTGAAGGAATGACAAG

Function

NR:

description
PREDICTED: synergin gamma isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7098 True 248 lncRNA 0.46 2 33892474 33893143

Neighbor

gene id symbol gene type direction distance location
AMCG00004113 rhob,LOC105888539,LOC103025336,LOC105907285,LOC106607565 coding upstream 124838 33767046 ~ 33767636 (+)
AMCG00004110 NA coding upstream 131017 33747909 ~ 33761457 (+)
AMCG00004109 NA coding upstream 326611 33561024 ~ 33565863 (+)
AMCG00004108 5nt1a,LOC105899417,LOC102795473 coding upstream 439802 33435750 ~ 33452672 (+)
AMCG00004100 osr1 coding upstream 644910 33241032 ~ 33247564 (+)
AMCG00004115 NA coding downstream 12148 33905291 ~ 33912885 (+)
AMCG00004121 NA coding downstream 226428 34119571 ~ 34130023 (+)
AMCG00004122 NA coding downstream 237983 34131126 ~ 34133612 (+)
AMCG00004125 NA coding downstream 738078 34631221 ~ 34638669 (+)
AMCG00004124 klhl29,LOC107738561,LOC107678777 coding downstream 773249 34666392 ~ 34685790 (+)
G5750 NA non-coding upstream 120626 33769589 ~ 33771848 (+)
G5731 NA non-coding upstream 123660 33685727 ~ 33768814 (+)
G5720 NA non-coding upstream 264967 33626367 ~ 33627507 (+)
G5707 NA non-coding upstream 292463 33597892 ~ 33600011 (+)
G5688 NA non-coding upstream 324995 33566173 ~ 33567479 (+)
G5787 NA non-coding downstream 185208 34078351 ~ 34080785 (+)
G5788 NA non-coding downstream 188683 34081826 ~ 34090122 (+)
G5804 NA non-coding downstream 399128 34292271 ~ 34292501 (+)
G5808 NA non-coding downstream 488725 34381868 ~ 34382099 (+)
G5867 NA non-coding downstream 1000959 34894102 ~ 34895661 (+)
G5642 NA other upstream 761288 33130120 ~ 33131186 (+)
AMCG00004079 NA other upstream 1490091 32400405 ~ 32402383 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 2997647 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 3585299 30296867 ~ 30307175 (+)
G5245 NA other upstream 3620950 30271210 ~ 30271524 (+)
AMCG00004138 fkbp1b other downstream 959720 34852863 ~ 34870320 (+)
AMCG00004158 NA other downstream 1859307 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 2134136 36027279 ~ 36045282 (+)
AMCG00004167 NA other downstream 2368645 36261788 ~ 36278234 (+)
AMCG00004179 ptrhd1,LOC103399259 other downstream 2794487 36687630 ~ 36697885 (+)

Expression


Co-expression Network