G6009


Basic Information

Item Value
gene id G6009
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 35472868 ~ 35475341 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7385
TTCTACCCTTGCTAACGAGAAGAAGAGGCACATGACACATGcaacagcctcctctgagggtccaacgaggcgcctcgtcccccaccatggaagtctgatgaggcacaacccatcccagaagcacctcaccacggagggtcaacggggcatccacacccaaggtttgATGAGCCATTgcaacccaaagcctgttgatggtccaaaccctccacccccgatggccagcgagaggcctcctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7385 True 241 lncRNA 0.43 2 35472868 35475341

Neighbor

gene id symbol gene type direction distance location
AMCG00004148 NA coding downstream 49638 35419864 ~ 35423230 (-)
AMCG00004146 NA coding downstream 59120 35407247 ~ 35413748 (-)
AMCG00004147 NA coding downstream 78532 35392028 ~ 35394336 (-)
AMCG00004144 mut coding downstream 97706 35374824 ~ 35375162 (-)
AMCG00004142 clic5,LOC103355727,LOC105017981 coding downstream 156503 35301103 ~ 35316365 (-)
AMCG00004152 ccm2 coding upstream 1217 35476558 ~ 35495919 (-)
AMCG00004153 xkr6,LOC107552036,LOC108258067,LOC107734270 coding upstream 44682 35520023 ~ 35531270 (-)
AMCG00004154 LOC107723320,LOC107746102,LOC107701509,LOC107561941,LOC105897758,LOC105895740 coding upstream 167186 35642527 ~ 35643105 (-)
AMCG00004156 LOC107676230 coding upstream 209914 35685255 ~ 35691933 (-)
AMCG00004155 NA coding upstream 221281 35696622 ~ 35720187 (-)
G5929 mut non-coding downstream 565895 34903366 ~ 34906973 (-)
G5869 NA non-coding downstream 574961 34872613 ~ 34897907 (-)
G5870 NA non-coding downstream 594649 34877500 ~ 34878219 (-)
G5805 NA non-coding downstream 1180372 34292269 ~ 34292496 (-)
G5721 NA non-coding downstream 1845361 33626309 ~ 33627507 (-)
G6030 NA non-coding upstream 192696 35668037 ~ 35668538 (-)
G6034 NA non-coding upstream 197110 35672451 ~ 35672679 (-)
G6037 NA non-coding upstream 198605 35673946 ~ 35676120 (-)
G6068 NA non-coding upstream 344917 35820258 ~ 35820483 (-)
G6077 NA non-coding upstream 504098 35979439 ~ 35979839 (-)
AMCG00004143 mut,LOC107726528,LOC107697172,LOC107726757 other downstream 58422 35344663 ~ 35414446 (-)
AMCG00004132 NA other downstream 508983 34954706 ~ 34963885 (-)
G5871 NA other downstream 580255 34891901 ~ 34892613 (-)
G5801 NA other downstream 1337268 34132098 ~ 34135600 (-)
AMCG00004120 NA other downstream 1441321 34015368 ~ 34031547 (-)
AMCG00004178 NA other upstream 1020431 36495772 ~ 36540841 (-)
AMCG00004189 NA other upstream 1293707 36769048 ~ 36779062 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other upstream 1308402 36783743 ~ 36787122 (-)
AMCG00004203 NA other upstream 1848669 37324010 ~ 37381953 (-)
G6441 NA other upstream 1892644 37367985 ~ 37368822 (-)

Expression


Co-expression Network