G6136


Basic Information

Item Value
gene id G6136
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36269114 ~ 36270818 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7523
GAAAAGCACAAGAttccattttataaatatttttttttattttttttatttgttctacaGTTGTAGATTTGCTGTCTATCAGTATCTTATTGAATTCTGTGAGGATGAACTCATGAAAGCACACTGTCTTGATGAACCATGTTGAATTTAAAGGAATAAACCAAATCTTCAATCTTCACTGGAAATGTcctaaaaaacacaagaagcatggTGTGAGTAAAGCATGTAAACTCATCTATTCATTAAACTGAGAAGAACATTTTGTTTGGTCAGATTGGAAGAGGGGACgtgattgtaatgttttctgatCTGTCTTGTGGAGAGGGTTCGCATTTTACAGACAAAAGTTGGCTAAAGTTGTCACTTTGCTTCCCTATGATTTGGTCATGGTTTTTGGATTTCAGGACGGATCATCTGAGCTCtaagaacaaagcaaaaactgaaaaaagctgCTGATAAACAGTATCAATGATCTACCTCTGATTCAACGTATGCTCACTTAGTCatttatgtctctctctccacaaaCAAGCTTTAATAGCTAACAAAAACTCCTTCAGTTAGATTCAATCCAGGCTTTGACGCTCTTCTCTGATGCTGGTCCCAATAAATCAATCAGATAGCGAAGGAGAGCCGGAACGAGGTCAGAACCTCTTTGCACCCGTGTCCCTGACTGCCTATATAAACATCTTGTCTTACGATCATACACCCTGGGTGCATGGTAAGGAAGCATCATTAAGTAATGACCAGCTACAGTAATACTGCCCAAATGTCTAAGGGGACAAGGGGGCAGGAATGGGTTTATTAACCTTACAGAAGGTCCAAACTCCTCCAAGCCAAGAAGCCTAGAATTCCCGGGACTGTGGTAGATGTGTGGATGTGGACTGATCACACTGTGGCTCTTGATCTTTATTCATTAGGAAATGGCCCTGACTACCTGATATAGGAAGTGAAGGAGCTGTAGGTTTTGTTAAAGGCTAGCCGCCGGTGCTGTAATTCGCAGTGGCTGTTGACCTTTGGTGAAAGGAAGGATGCTGCTGCAGATATGGTGGtttagaaataaagaaataaaaccatgtGGAGAGGCATGTTTGTGCCCCTCCACTTGTCACGCCCTGAACACGAGGTTATCGAGTTATCGAGGTTGGAGTTGGAGGGACTTTGTGTTCAGATTGAACGAGAGGAGGCAAACGGAGTCCATTCTCCATTCTGCATGGATATTTTACTTAAATGAGATGTTCAGCTTGGACATCATCTTCCCCCTACTGAATTACAGCAGTTCGGCCTAATACATATGAATAATACTAAAGTGGCAAAACCCAATTTCAGTCTGGAGAACTCAAGCCATGAGCTATACATCGATcacccataacattatgaccacctgcctaatattgtgtaggtcccccttttgccaccaaaacagccctgacctgtcgaggcatggactccactagacctctgaaggtgtgctgtggtatctggcaccaagacgttagcagcagatcctttaagtcctgtaagttgcgaggtggggcctccatggatcggacttgtttttccagcacatcccacagatgctcgattggattgagatctggggaatttggaggccagtcaacaccttgaatttgtgattcatcagaccaggagaccttcttccattgctccgtggtccagttctgatgctcacgtgcccattgta

Function

GO:

id name namespace
GO:0006091 generation of precursor metabolites and energy biological_process
GO:0070546 L-phenylalanine aminotransferase activity molecular_function
GO:0080130 L-phenylalanine molecular_function
GO:0008793 aromatic-amino-acid molecular_function

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU7523 True 1705 lncRNA 0.46 1 36269114 36270818

Neighbor

gene id symbol gene type direction distance location
AMCG00004162 slc30a3,slc30a2 coding downstream 96415 36167301 ~ 36172699 (-)
AMCG00004155 NA coding downstream 548927 35696622 ~ 35720187 (-)
AMCG00004156 LOC107676230 coding downstream 577181 35685255 ~ 35691933 (-)
AMCG00004154 LOC107723320,LOC107746102,LOC107701509,LOC107561941,LOC105897758,LOC105895740 coding downstream 626009 35642527 ~ 35643105 (-)
AMCG00004153 xkr6,LOC107552036,LOC108258067,LOC107734270 coding downstream 737844 35520023 ~ 35531270 (-)
AMCG00004169 NA coding upstream 7140 36277958 ~ 36285408 (-)
AMCG00004168 dnajc5g,LOC103043078 coding upstream 17577 36288395 ~ 36300239 (-)
AMCG00004172 LOC106571444,LOC106607850 coding upstream 42103 36312921 ~ 36339478 (-)
AMCG00004171 NA coding upstream 69356 36340174 ~ 36344689 (-)
AMCG00004175 NA coding upstream 224283 36495101 ~ 36495451 (-)
G6129 NA non-coding downstream 11925 36256989 ~ 36257189 (-)
G6103 NA non-coding downstream 105680 36161647 ~ 36163434 (-)
G6077 NA non-coding downstream 289275 35979439 ~ 35979839 (-)
G6068 NA non-coding downstream 448631 35820258 ~ 35820483 (-)
G6037 NA non-coding downstream 592994 35673946 ~ 35676120 (-)
G6197 NA non-coding upstream 115544 36386362 ~ 36390506 (-)
G6199 NA non-coding upstream 129347 36400165 ~ 36401482 (-)
G6200 NA non-coding upstream 131574 36402392 ~ 36403386 (-)
G6241 NA non-coding upstream 283089 36553907 ~ 36555108 (-)
G6243 NA non-coding upstream 285288 36556106 ~ 36557331 (-)
AMCG00004143 mut,LOC107726528,LOC107697172,LOC107726757 other downstream 854668 35344663 ~ 35414446 (-)
AMCG00004132 NA other downstream 1305229 34954706 ~ 34963885 (-)
G5871 NA other downstream 1376501 34891901 ~ 34892613 (-)
G5801 NA other downstream 2133514 34132098 ~ 34135600 (-)
AMCG00004120 NA other downstream 2237567 34015368 ~ 34031547 (-)
AMCG00004178 NA other upstream 224954 36495772 ~ 36540841 (-)
AMCG00004189 NA other upstream 498230 36769048 ~ 36779062 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other upstream 512925 36783743 ~ 36787122 (-)
AMCG00004203 NA other upstream 1053192 37324010 ~ 37381953 (-)
G6441 NA other upstream 1097167 37367985 ~ 37368822 (-)

Expression


Co-expression Network