G6199


Basic Information

Item Value
gene id G6199
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36400165 ~ 36401482 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7595
CAAGAGAGGGGGCACATAGCATCAATGTAGCAGATCTGTTGTCTGCGTCTGAAATGGGCTCTGGGTGGCACAATAATCTGtgatattcattcattcagtatTAGTCTGGGAAAGTAGGCTACTTCTTATATGTGATATAGTCTGTGTTGGACAAACTGCTATTGTCAGTCTCCCTGCACCGTCTTCAGTCCGGAGAGCGCAGTCAGTAATACTATAGGATACTGTATTTACAACCGTTGAACATTTTGCATGAAATGCgtaaaaaaacaacccaaaacatGATTGTATATAGCAggtgcattttttaaaaagcgCGCttctatataatttatattatatgtattataaattaaagtACATTTCTAGAGCTAAAGGTGCAATATATAGAGCTGTATTTAAATAAGAGATTGTGCACACATACGTGTAATAAAACTACATTAAGCCGAATTGCCATGAACAGTGGAGCCAGTTTTTATCCTAAAAAatagcacaaacaaacaaaggcgAAATGTAGACAATGTAATCAGCCGGAGGTAGCCTTAGGATTAATTAGAATGAGATTCATAATAAAtagtataatatatgtataccCTATGCATGAAACAATAATTGCTTGCGGATTGCAGACTCACTACTTCGACGTTTAACCTCATATAATACTTTTGTAAAACCGAGGTTGATACCGGAAAACAtagcctaattaaataaaacaacaacacgcTCTTGTATCGTGTGAAATACAGCCTAACATAAAGTGAAGAACATATGCACGCAAAAACAGACGAGACCAGGAGCAGTTGATGCTCTACAGTCGTGCGTCCTCCCCGTGTTCGCGACTGAGGCCTACAGACGGCACGCACCCTGGCTGTGAAGAGCAGGCTGCTGGATTCAGGGCTCACATGGACCTGCCCAGGCGTTATGTATCAATCTCTATACGAATACGCTACACAGAATAGCAGCCCAGGTTACTGAGCTCTCCGTGCTTTGTGTAACATGTACAGGAATTAAAAGTGATGCGACGGCCTTTCAAAGGACACTATCGCCTTTATACTGGACAGACTGCAGTAGGATGCTTTTGTGTTTTCGCAggcatttacatatttgtaatacatGTTTCCATTTGAATGACTGTAACGAATATCCCATAATAaaaccatatatttatattctttttttatagcattaagaacattttttctctgaaaataaacagaatttgAAGTCGTCCAGCCTAATTGAATATCCAGTCCTgacttatttattatattatttagtaAAACATTTCGTGGTTGAGTGTTGTATAAAGGTGCCCACTTTT

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU7595 True 1318 lncRNA 0.38 1 36400165 36401482

Neighbor

gene id symbol gene type direction distance location
AMCG00004171 NA coding downstream 55476 36340174 ~ 36344689 (-)
AMCG00004172 LOC106571444,LOC106607850 coding downstream 60687 36312921 ~ 36339478 (-)
AMCG00004168 dnajc5g,LOC103043078 coding downstream 99926 36288395 ~ 36300239 (-)
AMCG00004169 NA coding downstream 114757 36277958 ~ 36285408 (-)
AMCG00004162 slc30a3,slc30a2 coding downstream 227466 36167301 ~ 36172699 (-)
AMCG00004175 NA coding upstream 93619 36495101 ~ 36495451 (-)
AMCG00004177 rcan2,LOC108429336,LOC107675064,LOC107727622,LOC107602203 coding upstream 173770 36575252 ~ 36577556 (-)
AMCG00004185 NA coding upstream 244531 36646013 ~ 36663669 (-)
AMCG00004181 NA coding upstream 268833 36670315 ~ 36677129 (-)
AMCG00004183 NA coding upstream 276295 36677777 ~ 36681459 (-)
G6197 NA non-coding downstream 9659 36386362 ~ 36390506 (-)
G6136 NA non-coding downstream 129347 36269114 ~ 36270818 (-)
G6129 NA non-coding downstream 142976 36256989 ~ 36257189 (-)
G6103 NA non-coding downstream 236731 36161647 ~ 36163434 (-)
G6077 NA non-coding downstream 420326 35979439 ~ 35979839 (-)
G6200 NA non-coding upstream 910 36402392 ~ 36403386 (-)
G6241 NA non-coding upstream 152425 36553907 ~ 36555108 (-)
G6243 NA non-coding upstream 154624 36556106 ~ 36557331 (-)
G6309 NA non-coding upstream 364090 36765572 ~ 36765809 (-)
G6326 NA non-coding upstream 378996 36780478 ~ 36780691 (-)
AMCG00004143 mut,LOC107726528,LOC107697172,LOC107726757 other downstream 985719 35344663 ~ 35414446 (-)
AMCG00004132 NA other downstream 1436280 34954706 ~ 34963885 (-)
G5871 NA other downstream 1507552 34891901 ~ 34892613 (-)
G5801 NA other downstream 2264565 34132098 ~ 34135600 (-)
AMCG00004120 NA other downstream 2368618 34015368 ~ 34031547 (-)
AMCG00004178 NA other upstream 94290 36495772 ~ 36540841 (-)
AMCG00004189 NA other upstream 367566 36769048 ~ 36779062 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other upstream 382261 36783743 ~ 36787122 (-)
AMCG00004203 NA other upstream 922528 37324010 ~ 37381953 (-)
G6441 NA other upstream 966503 37367985 ~ 37368822 (-)

Expression


Co-expression Network