G6328


Basic Information

Item Value
gene id G6328
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36861547 ~ 36891746 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7756
AAGTTTTTAAGCTGGTTGCTGTTCTCATTGATGAGGGCTTCCTCTCTGGCAGATAGTCTTTCAGCACGTTTTTTTATCtctaatcatttttattttttttataataaaaaataataaaaaattaagccCTTGTAATAGCTTTTTTGAATACCAGCTCCAGAGTTCTTTGctgcaacatttatatttagctgCGTTTTTTCCTAGCCGATTGTTTGCTCGCTGCTGTTGAGGTTGGTGTCGGGTGTGCACTATGCCGGTCCCTCAGATGGGTTGGTATCCTCCAATGAAGGTCAGCCGGGCTGGTATCATCCTGAGGAGCCCCACATTGCCAAGACCAACCCCTCAGCTGTCCCCTCAGGTTCAGAATGGACCGTCGCAGGAGGAGGTGGAGATCCAGAGAAGGCAGCTGCAAGAGCAGCAGCGTCTGAAGGacctggagagggagagactggAGCGAGAACGGCTGGAGAGAGAACGCCTGGAGCGGGagaggatggagagagagaggatggagCGGGAGAGGTTGGAGAGAGAACGCCTGGAGCGGGAgagactggagagagagaggttggaACGAGAgaggctggagagagagaggttggaGCGAGAGCGTGCAGAGAGGGAGCGTGCGGAGCGAGAGCGGCTGGAGAGGGAACGACTGGAGCAGGAGCAGCTGGAGATAGAGCGGCTGGAGAGGGAACGGCTGGAGAGAGAGCGGCTGGAGAAAGAGCATCAGGAGCAGCTCGACAGGGAGCAGATggactgggagagagagcgCCGCATGTCGAATGCTGCTTCCCCTGCCTCCGCTGAACACTCTGTAAACTCTGTGCTGGGAGAGTCCAGCCCCTGTGCTCCAGAGCCGGCGGCCTCTCTGCTCACTGATCCTCACACCCAGCCGGATGCAGTGCAGGGGCCAcctgctccccctcccccacctcctctccctcccGGTTCCACTGTGACTCCAGTAACTGgacctcctccccctccctgccCACCGCCGCCTCctcccctgc

Function

GO:

id name namespace
GO:0009123 nucleoside monophosphate metabolic process biological_process
GO:0009124 nucleoside monophosphate biosynthetic process biological_process
GO:0009126 purine nucleoside monophosphate metabolic process biological_process
GO:0009127 purine nucleoside monophosphate biosynthetic process biological_process
GO:0009156 ribonucleoside monophosphate biosynthetic process biological_process
GO:0009161 ribonucleoside monophosphate metabolic process biological_process
GO:0009167 purine ribonucleoside monophosphate metabolic process biological_process
GO:0009168 purine ribonucleoside monophosphate biosynthetic process biological_process
GO:1990351 transporter complex cellular_component
GO:0034702 ion channel complex cellular_component
GO:0034703 cation channel complex cellular_component
GO:0034704 calcium channel complex cellular_component
GO:0005891 voltage-gated calcium channel complex cellular_component
GO:1902495 transmembrane transporter complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7756 True 1019 TUCP 0.40 5 36861547 36891746

Neighbor

gene id symbol gene type direction distance location
AMCG00004186 slc5a6,LOC107601523,LOC107690043,LOC103362495 coding upstream 96341 36748856 ~ 36765206 (+)
AMCG00004180 NA coding upstream 115482 36742627 ~ 36746065 (+)
AMCG00004176 slc25a27,LOC107553473 coding upstream 191899 36663802 ~ 36669648 (+)
AMCG00004174 NA coding upstream 359431 36501826 ~ 36502116 (+)
AMCG00004173 msra,LOC106571446 coding upstream 392523 36454991 ~ 36469024 (+)
AMCG00004191 NA coding downstream 20900 36912646 ~ 36918990 (+)
AMCG00004190 NA coding downstream 45158 36936904 ~ 36939547 (+)
AMCG00004193 LOC104951820 coding downstream 307177 37198923 ~ 37231208 (+)
AMCG00004197 LOC107698324,LOC104954172 coding downstream 502356 37394102 ~ 37417947 (+)
AMCG00004199 NA coding downstream 535703 37427449 ~ 37445287 (+)
G6321 NA non-coding upstream 79317 36782012 ~ 36782230 (+)
G6320 NA non-coding upstream 80130 36780561 ~ 36781417 (+)
G6319 NA non-coding upstream 82397 36778880 ~ 36779150 (+)
G6318 NA non-coding upstream 82970 36778368 ~ 36778577 (+)
G6317 NA non-coding upstream 83382 36777934 ~ 36778165 (+)
G6383 NA non-coding downstream 136293 37028039 ~ 37028246 (+)
G6405 NA non-coding downstream 266430 37158176 ~ 37265504 (+)
G6421 NA non-coding downstream 423899 37315645 ~ 37318146 (+)
G6427 NA non-coding downstream 445780 37337526 ~ 37341014 (+)
G6428 NA non-coding downstream 452315 37344061 ~ 37344445 (+)
G6314 NA other upstream 87024 36774001 ~ 36774523 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 163662 36687630 ~ 36697885 (+)
AMCG00004167 NA other upstream 583313 36261788 ~ 36278234 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other upstream 816265 36027279 ~ 36045282 (+)
AMCG00004158 NA other upstream 1095367 35752450 ~ 35766180 (+)
G6369 NA other downstream 107611 36999357 ~ 37000158 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other downstream 940877 37832623 ~ 37847720 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 3434664 40326410 ~ 40341235 (+)
G7094 NA other downstream 4567830 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 5318684 42210430 ~ 42216362 (+)

Expression


Co-expression Network