Gene
RNA
| Item | Value |
|---|---|
| gene id | G6653 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 38858118 ~ 38859005 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0042737 | drug catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU8146 | True | 888 | lncRNA | 0.39 | 1 | 38858118 | 38859005 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004224 | crls1,LOC107663140,LOC107737905,LOC107678734,LOC103476593 | coding | upstream | 2801 | 38850789 ~ 38855317 (+) |
| AMCG00004223 | mcm8,LOC107738559 | coding | upstream | 8107 | 38840016 ~ 38850011 (+) |
| AMCG00004222 | NA | coding | upstream | 24150 | 38825821 ~ 38833968 (+) |
| AMCG00004218 | NA | coding | upstream | 114552 | 38731508 ~ 38743566 (+) |
| AMCG00004214 | NA | coding | upstream | 631307 | 38225556 ~ 38226811 (+) |
| AMCG00004225 | NA | coding | downstream | 95132 | 38954137 ~ 38963635 (+) |
| AMCG00004228 | NA | coding | downstream | 390457 | 39249462 ~ 39293233 (+) |
| AMCG00004229 | NA | coding | downstream | 443704 | 39302709 ~ 39312703 (+) |
| AMCG00004230 | NA | coding | downstream | 538498 | 39397503 ~ 39436248 (+) |
| AMCG00004233 | NA | coding | downstream | 582121 | 39441126 ~ 39442709 (+) |
| G6627 | NA | non-coding | upstream | 80618 | 38775953 ~ 38777500 (+) |
| G6617 | NA | non-coding | upstream | 101866 | 38749914 ~ 38756252 (+) |
| G6598 | NA | non-coding | upstream | 241654 | 38616244 ~ 38616464 (+) |
| G6586 | NA | non-coding | upstream | 391475 | 38466396 ~ 38466643 (+) |
| G6585 | NA | non-coding | upstream | 439342 | 38416598 ~ 38418776 (+) |
| G6667 | NA | non-coding | downstream | 67733 | 38926738 ~ 38927030 (+) |
| G6676 | NA | non-coding | downstream | 107673 | 38966678 ~ 38966890 (+) |
| G6684 | NA | non-coding | downstream | 263542 | 39122547 ~ 39148294 (+) |
| G6769 | NA | non-coding | downstream | 909379 | 39768384 ~ 39768607 (+) |
| G6771 | NA | non-coding | downstream | 911460 | 39770465 ~ 39770698 (+) |
| AMCG00004210 | fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 | other | upstream | 1010398 | 37832623 ~ 37847720 (+) |
| G6369 | NA | other | upstream | 1857960 | 36999357 ~ 37000158 (+) |
| G6328 | NA | other | upstream | 1966372 | 36861547 ~ 36891746 (+) |
| G6314 | NA | other | upstream | 2083595 | 36774001 ~ 36774523 (+) |
| AMCG00004179 | ptrhd1,LOC103399259 | other | upstream | 2160233 | 36687630 ~ 36697885 (+) |
| AMCG00004257 | dusp10,LOC106607590 | other | downstream | 1467405 | 40326410 ~ 40341235 (+) |
| G7094 | NA | other | downstream | 2600571 | 41459576 ~ 41507231 (+) |
| AMCG00004304 | NA | other | downstream | 3351425 | 42210430 ~ 42216362 (+) |
| G7329 | fabp7,LOC108247051,LOC104945778 | other | downstream | 3829774 | 42688779 ~ 42691109 (+) |
| AMCG00004355 | hyou1,LOC100380749 | other | downstream | 5759180 | 44618185 ~ 44640732 (+) |
