G6769


Basic Information

Item Value
gene id G6769
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 39768384 ~ 39768607 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU8288
tgcaaattcattaaaaataaaaaacaaaaaaagcacatgtacataagtattcacagcctttgctcaatactttgttgaagcacctttggcaccaattacagcctcaagtctttttgagtatgatgctacaagcttggcacacctatttttgggcagtttctcccattcttctttgcaggacctctcaagctccatcaggttggatggggagcgtcagtGCACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8288 True 224 lncRNA 0.56 1 39768384 39768607

Neighbor

gene id symbol gene type direction distance location
AMCG00004235 NA coding upstream 170130 39592943 ~ 39598254 (+)
AMCG00004240 NA coding upstream 208457 39559492 ~ 39559927 (+)
AMCG00004231 lamp5,LOC106571558 coding upstream 314896 39445199 ~ 39453488 (+)
AMCG00004233 NA coding upstream 325675 39441126 ~ 39442709 (+)
AMCG00004230 NA coding upstream 332136 39397503 ~ 39436248 (+)
AMCG00004236 hsp90ab1,hsp90bb coding downstream 70761 39839368 ~ 39846699 (+)
AMCG00004246 tmem151b coding downstream 117058 39885665 ~ 39892826 (+)
AMCG00004249 NA coding downstream 241918 40010525 ~ 40012375 (+)
AMCG00004250 NA coding downstream 253022 40021629 ~ 40030108 (+)
AMCG00004248 NA coding downstream 269104 40037711 ~ 40054452 (+)
G6684 NA non-coding upstream 620090 39122547 ~ 39148294 (+)
G6676 NA non-coding upstream 801494 38966678 ~ 38966890 (+)
G6667 NA non-coding upstream 841354 38926738 ~ 38927030 (+)
G6653 NA non-coding upstream 909379 38858118 ~ 38859005 (+)
G6627 NA non-coding upstream 990884 38775953 ~ 38777500 (+)
G6771 NA non-coding downstream 1858 39770465 ~ 39770698 (+)
G6807 NA non-coding downstream 175893 39944500 ~ 39945055 (+)
G6819 NA non-coding downstream 246660 40015267 ~ 40034323 (+)
G6840 NA non-coding downstream 320001 40088608 ~ 40088914 (+)
G6847 NA non-coding downstream 341593 40110200 ~ 40113951 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 1920664 37832623 ~ 37847720 (+)
G6369 NA other upstream 2768226 36999357 ~ 37000158 (+)
G6328 NA other upstream 2876638 36861547 ~ 36891746 (+)
G6314 NA other upstream 2993861 36774001 ~ 36774523 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 3070499 36687630 ~ 36697885 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 557803 40326410 ~ 40341235 (+)
G7094 NA other downstream 1690969 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 2441823 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 2920172 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 4849578 44618185 ~ 44640732 (+)

Expression


Co-expression Network