G6792 (hs90b,hsp90bb,hsp90ab1)


Basic Information

Item Value
gene id G6792
gene name hs90b,hsp90bb,hsp90ab1
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 39841935 ~ 39849123 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU8320
ACTCGGTTCTCCTTTTATTATTGGTTATcatgcacagaattaaaaccaaacagtTGTAAAGTACTTTTTGCTCACACAGATATGCATACagtaccgttcaaaagttttaaaacacccccatttttccagtttttattgaaatttaagcagttcaagtccagttaATTACTTGAAATGGTACagaggtaagtggtaaactgccagaggttaaaagaAACAGTTAAGGTTaccaaaaatggaaaaataatgtacatttcagagttatatactgtgctactacaccctcttaagcattattaggcagtgttacgtgcagcAACTGCAGGTTTCTGTAttcttaataaaaacactgcCCATTAAACATGCAGGCCTATATGTTTTCCATCACAATTACAGATCTCAAAGAAATTCTAAATAATACTCAATGATTCCACAGTCTTCTAGCAAAACATATTCAGTCATGTGGAGGAAGTCCACACATGATTATTATTGGTGCCATTAGACCCAATAGACATTGACCTTTAATCCCTTTAGAGTATCTTATCACTTAATGATAAAgtatttcaaagttaaaatgTGATTCTGCTAAAGGGTTGGAACTCTAAGACCGATTATGCATCTTGCTACAGAACCTTTCAACTAGTTACTTCACCCatctacattatattttaattctttatcAGGTATGGAAAAGTATTAAGTACAGAAGTGTAGTGTTAAGTACCTGATGGCTTTATTGCAGGGGAGTCCAACTGGACCTTAATGGATACATatccagttgtttatttttttatatatgaaatgttGAACAGTCTTAATAATTGGATCAACTAAGTAGATGAAAACTGGGGTCTATGGTACAAAAAGACAAGAGAATTTGGCCCCCCAGAGCAATCACATGGCTGACCTTCAACTGACATTGTACACCTTTAATCCCTGGTTCGGAAACTGCTCGTCATGCATTACATGCATTGCCGTGGAAATTCATGTAACATGGGAATGGTCTAATTTTTATGTAGTACTGGGcttcaaatgtaaatgattaAAAGTGAGAGTAGacatgggtttgtgtgtgtaccagTTGGTGGCGGACGGATGGAGAGACGTCTGTGTGTGCTTGGGGCTGTCCCCGGTTTCATGACTGAACTGCTAGGAACCACATGGTTGACAAGTTTACCTTTTTGAAGTTGAGGCAATTTAGCATTTCTACTACAAGTCAGACATACATCACAGTTCCTACTCCTACAAATTTTAAGTTGTGaagatacatttttctttctaactGGGGAAGTTATCTCAGCTGGATAACAATTTTCCCagttagaaagaaaaatgtcttcacaaattaaaatgccattCCTAAAAATTTACATAGCTTCCCCACACAAACGCaagtaaaaaaaagtcactAAAAACTCATGATACTGTCCTTCTGATTGTGTCAGGACTTCATCTAACAAGTAGAAAGACGTGCCTGGACCAGAGACAGCAGAGGTTCTTATTCAGTGCATTACTTTGCCAGGAGGAAAGCCACACAAACTGAATTCCCCTCTTGAAGCAACACATTGCTGTAAAGACCAGTGTGTTGTGATTCGCAGCGTAGGACACCCACTCAACATTGCTGACGGTCAGCCCACTTTAGGTTGAGTCAGCATGTTGCAGGACTGGGAATCCCAGGATCTCTACAAATATCAATATGATGAGCCATTGCTGCTCTTTAAATGAGTAGGTTATGCAATATGAAACTCTAAACGCACATGGCTTAATTTATGTAGGTCTTCTGTAGTCCTTAATTCTTCAATGATTTGTACTTCCCCACCATTCTGAATAACCAAAAATGGTATTACTAGTCTAGGCCTTAATTGTGAACCACAGATTTACACTGATCTATGattgcattttataaatgtaagatGCAAGTCAGTCTAGAAGAGGTTAACAACCTCCCTTGGTGTGCAATGAAGTTTGATTTGCAGTACATGACCCGTATAAAGAATATTTTAAGTCCATGATGTAGAACAGAGCATGGACTCAAGAAATCCCAAAAttaagcaacatttaaaatgtatatgatctCACACTGCAAAACAACTTACTACTTTCAGTGTTCAACACAGCTGCAAAAGAGCTCAACTTAAACTGgtacacactgccacacactgGAGACTATGAAATTGCAAGATGGtcttcacatttaaataaaatgtgaactcCAATTGGATTTATCATTAACGAGGTTGCAAGTAAGAATATTGAACATTTTAGGCTTATAAAAGGACCTTTTCCATTTGGAAATCTTTTGAAAGCCTAGATTAAAATCAGCCATTATTGGTTCAGACTGCTTAATGTGgaaaggtttaaaaatattaaaaaaaaaaaaaatgtataggaaaCTTATAGATCAGATGGTAGAACAGGTATTAAAGACAAGACTGGAGCATTACACTATAATTCCTTCAACTTTACTCCCACCAGGACAAATACATGCAATTGTAAAAGCAGCAGAGTAGTTATAAAAATCTCCTTTACACAAGATAGACatttaaacgttttattttgcaaaataaaggACAAAGACTGAACATGAGAAATCAGACAGAGACCTGAAGGGTTCCTCCTCATACAAAGTTCAAGTTGCACAGACGAACCCCTTATCCAATCTCTTCAGGAATGGAAGGGAATAGCAACCTCATGCCCCACATTCATAAGTGTACAATTACCAGTCCCTTAattctttaacaaaaaacaaaacagtgcaaCAGGGTACTTTTGAACACCATGCGCTGCCAGCTGCTAACTAGACACCTTGTAAAAAGCCATATTTCTACAATTTGAGAACAAGGCATGATCAGAAGGCAACACTAGGCCGCTAACCTTTACTGTATCAATTCTCCTTAAGGACACTGGCCAAATTAGTTTCCAAACTGGGgcgtggaaagaaaaaaaacagcttaaatCTTAAAAGACATTTGGAATTGAGGTAAACTGTGGCATTGAAGTTTAATCCACTTCCTCCATGCGGGATgcatcctcctctccctccagaGGTGGGATCTCATCTGGAACTGGCACAGTGCCGGGCTCCTCTGTAGGAacttcatcatcatcaattcCAAGCCAAGCTTGATCATCCTGTAGATGCGATTTGAGTGGGTCTGGGGATCGTCAAGGGAAAACCCAGATGACAGAAGGGCGGTCTCAAAGAGAAGGATGACCAAGTCCTTCACAGCCTTGTCGTTCTTGTCTACATCAGCCTTCTGCCTCAGAGTCTCCACAATAGGGTGGTCTGGGTTGATCTCCAGGTGCTTCTTGGCCATCATATAGCCCATGGTGGAGTTGTCCCTCAGAGCCTGTGCTTTCATGATACGCTCCATGTTGGCAGTCCACCCGTAGGTGCTTGTAACAATGCAGCATGGAGAGGAGACCAATCGGTTGGATACGGTGACCTTTTCAACTTTCTTGTCCAAGATCTCCTTCATCAGTTTGCAGAGGTTCTCAAACCTGGTCTTGTCCTCCtccattttcttcttctcctcctcatcctcagGGATGAGCTCCTCACAGCTGTCCATGATGAAAACTCTCCTCACATACAGCTTgatgttgttctttttcttcttgttctcAAAGAGGTCGAAGGGGGCACGGCGGGGAATGAAGAGCAAGGCTCTGAATTCTAACTGTCCCTCCACAGAGAAGTCTTCACAGCCAGGTGGTCCTCCCAGTCATTGGTGAGACTCTTGTAGAACTCCCCGTATTCTTCTGTGGTGATGTCATCAGGATTCCGTGTCCAGATGGGCTTGGTCTTGTTCAGCTCCTCCTGGTCAATGTACTTTTCCTtgatcttcttcttcttcttcttgtccttGTCCTTGGAATCCTCTTCATCATCTGAGCCTACATCCTCAATTTTGGGCTTCTCCTCACCATCAgccttctcctcttccttctcaGTCTTCTCCTCCTCTGCTTCATCATCACTGATTTCCTTCTCCCGTTCCTTTTaCGAAGAGGGTGATTGGGTATCCAATGAACTGAGAGTGCTTCTTGACAACCTCCTTGACTCTCTTGTCCTCAATGTATTCAGTCTGATCATCTTTCAAGTGCAGGATGACTTTGGTACCTCTTCCAATGGGTTCACctgTCAACCTTGACCGTGAAGGAGCCACCAGCAGACGACTCCCAGGCATACTGCTCGTCATCGTTGTGCTTGGTGATGACCACAACTTTCTCAGCAACCAGATAGGCAGAGTAGAAGCCCACACCAAATTGCCCAATCATAGAGATATCAGCACCAGCCTGAG

Function

symbol description
hsp90ab1 Predicted to enable several functions, including ATP binding activity; disordered domain specific binding activity; and unfolded protein binding activity. Acts upstream of or within blood vessel development and leukocyte migration. Predicted to be located in dynein axonemal particle; extracellular region; and nucleus. Predicted to be part of aryl hydrocarbon receptor complex. Predicted to be active in cytosol; perinuclear region of cytoplasm; and plasma membrane. Is expressed in eye and head. Human ortholog(s) of this gene implicated in multiple sclerosis. Orthologous to several human genes including HSP90AB1 (heat shock protein 90 alpha family class B member 1).

NR:

description
heat shock protein 90-beta 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8320 True 4304 TUCP 0.43 7 39841935 39849123

Neighbor

gene id symbol gene type direction distance location
AMCG00004239 NA coding downstream 179338 39657951 ~ 39662597 (-)
AMCG00004237 LOC107552869 coding downstream 196757 39601527 ~ 39645178 (-)
AMCG00004238 NA coding downstream 263966 39564916 ~ 39577969 (-)
AMCG00004234 pak5 coding downstream 362855 39457144 ~ 39479080 (-)
AMCG00004232 NA coding downstream 696675 39125700 ~ 39145260 (-)
AMCG00004241 slc35b2,LOC106607600 coding upstream 9365 39858488 ~ 39867709 (-)
AMCG00004244 NA coding upstream 23938 39873061 ~ 39881929 (-)
AMCG00004243 NA coding upstream 57146 39906269 ~ 39911511 (-)
AMCG00004242 NA coding upstream 85194 39934317 ~ 39942767 (-)
AMCG00004247 NA coding upstream 101569 39950692 ~ 39951933 (-)
G6793 NA non-coding downstream 853 39839168 ~ 39841082 (-)
G6770 NA non-coding downstream 73325 39768409 ~ 39768610 (-)
G6762 NA non-coding downstream 245296 39594941 ~ 39596639 (-)
G6668 NA non-coding downstream 914913 38926721 ~ 38927022 (-)
G6599 NA non-coding downstream 1225470 38616219 ~ 38616465 (-)
G6818 NA non-coding upstream 161288 40010411 ~ 40014259 (-)
G6822 NA non-coding upstream 166111 40015234 ~ 40034323 (-)
G6838 NA non-coding upstream 228894 40078017 ~ 40078283 (-)
G6872 NA non-coding upstream 277425 40126548 ~ 40126792 (-)
G6939 NA non-coding upstream 749831 40598954 ~ 40602815 (-)
AMCG00004203 NA other downstream 2459982 37324010 ~ 37381953 (-)
G6441 NA other downstream 2473113 37367985 ~ 37368822 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other downstream 3054813 36783743 ~ 36787122 (-)
AMCG00004189 NA other downstream 3062873 36769048 ~ 36779062 (-)
AMCG00004178 NA other downstream 3301094 36495772 ~ 36540841 (-)
AMCG00004302 NA other upstream 2215866 42064989 ~ 42067664 (-)
AMCG00004313 NA other upstream 2527603 42376726 ~ 42531006 (-)
AMCG00004336 NA other upstream 3553830 43402953 ~ 43450255 (-)
G7608 NA other upstream 4671791 44520914 ~ 44522213 (-)
AMCG00004364 NA other upstream 4691040 44540163 ~ 44561575 (-)

Expression


Co-expression Network