G6818


Basic Information

Item Value
gene id G6818
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 40010411 ~ 40014259 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU8357
CTCggatacattgtttatttataggtGCGCACTGCATACTGCGGTCAACAccaaaatacagaatacaaaatagaaaatgaatggaCCATTCAGGGATTCCTTACAGAAGAACACCAACAGCCTGGGATGCTCTGATGGCAATAGGTCACAGCAGAGAAGCTGGGGCTGCTGGCTCAGGTAGTGCCCTCGATGCCAGACCAGACAGTCTTGGTGCAGGACGAGCCATCGCGGGCAATGAACAGATGGTAGGAGGAAGTCAGGGACGTGGGGGTGGCGGGGGTAGCTAAGGTTTATGCTTGTAACTTGTACTGATTGCATTAATtgcacttttttaaaaacaaatattgtgaaATCTTCGTCACCCTGGGAGTCtgctagtaaataaataataataaagtcgaCAATGACCATCTTTGCCATACGGTTTAATCAGCACTGGCAAACTCTGGCTATTTAAAATCTTCTTAAGGGCTCCCCTGCTCTGTCTGCCTACACCTACCAACCCAGGATATGCACATCCATACCGACCCTGCCGGAGACCACAACCCTGGCACGCATGTCAGGGATTGGTGGCCCACTGGGGGAGGGTCTCATTTCCACCGAGCTGCAGTTTAATCCCCCCAAACTGAACGGATATCTTTTTATGTGGacatttttgattgtttaaaaCGTGAAGACAGCCGAGTTAATTGTGTATTCAAGCAACTGCTGTTTTCTCTCATTTAACGGGACATTTAAGTGGAACGCATTTGCTCTATTACAAATGTACAGTAGCATATAAGACTTGCGCCAATGTCTTCGTCACAACCCTGGGCGATTAACACAGCGGAAACGACCAGGGGCGACGTCTCTGTAACGAACGGTGTACAAGtgtaatgcattacaaaatctTTAGCCAAGAACGGATCTGTGAGTTCTAAGGTCAAATAAAAACCAACCAGTCCTAAAATAATAACACCTTCATTGATCGTCGGTTTGCATGATGTCCAAGGACAGATCTTTtgtcaatcaaaaacaaacaaacaaacaaacaaacgatcATGTAGGCTACAATAATTGAAATGATCAATTGTATAATTGTAGCATCgcatgtttgcattttaaagcaaagaaaatagtacaataaataaaatattgatgtaaaaGTAGGATGATGTTTCAGTCAGCAATCAAATAACAAGAAATTGCAACAGAAAATGCACCTTCATCGATATAATGTTGTTTACCCTTTATGGTTTATGGATTTCTGCaattataatttcctttcaaatgaacACTTACAGAAACGTTTCACAAATGCTCGAGCATCTCTGCAGAAAACAATTGCTTGTGTATTTGGTATAAGCAAGAAACCTCGCACCACGTTTTTCGTAGGATTTTGATCAAATGGTCTTCGTTTTAAATACAGCAACCTTTAATGTACaccaataaaaacacacaaatattgaaatcaaaTACCTGTAGTTTCAAAACATGTCAAactaaatgtatgtgtttatgtacagTAGTCTCatggtgcattatttattaaagcactgtttatgAAAAAAGTCTATGACAAAGTGACgaattattttgtcaaattagTTTCCTTGGGGCTATATTTCTAAATGCACGATTTACAAATTTCATTGCAATAGTAATGAAAACGACACAGtgagtatttaaaatgaccAACAAACAACTTGTACTTCAACACATCATAGACCAAGTGCAGGAGCTAATAAACAAAGTTGCACACAACAaatgctgtattattattattattattattaccttgaagacagaaaagaaagaaagagaagcaaAATGGTATTTGAATGCGCGTTGTTGAAATAAATCTcgaatattttaaaatccttaattAACTCATCAAAAGGACAATTACACGTCAGACTCGTCTCCTAAGTTACACAGAGCTTCCTGGGCTGCAGCATCACGACCTCCTCCCTCCTTGGAGGTATGCGTCTCGTTTCCCACCCAGCAGTAGTTGTCTGTGGCCGTGCTTTCCTTTTTGGTTTCTCTTTGGATACAGTTACGCCGACAGATCACGACAGCCGAAACAACAGCAATTAAAAGTAACAAGGCAACCAATGCCGACATTACAGAAGCAAGTATCCATGTCTGACTTGCATTGTGTATCTGACGCACATTGTTGCCATTTTCACCCGTTTTCTCGGTGGGGGCTGTGGAGTGGGAAGACTTTTGAACTGGTGCGCTAGTGTAGCTGAGCAAGGCCTCGTTTATAAAACCTGTTGTCTTTTCTTCACTGTCTCCCTTCATATATTCTGTTGGGGTTCGTGCTGCTAAAGTCACCATGGTCTCAGATGGCACCCTGTAGATGCCATCTGTATGCCGGGTAGTGTGGTCTCTCTCATCTATAGGTTTGGCAGTAGCTGAGGTTCTTACTGGGTTAGGGATGCATGCTATTCCGTCGGATGCCACCTTGTAATGTTGTTTGCAAGAGCACTCAAAGCTGCCGACAGTGTTTGCGCACCTCTGCTCACAGGGGTTGTTGAGGCACTCGTCAATATCCAAGCAGCTGCGCCCATCCTCTGATATCTCGAACCCCCCCAGGCAGTAACAAGAGAAAGATCCCGGCGCATTGAGGCAGCCTTGATCACACCTCGATGCCATGCACTCGTCTATATCGTGGCAGGTCCCATTAACCATGACGTACCCGTCTCTGCACGAACACGTGAAACTGCCCTGGCCGTTTGCGCACAGTTGTTCACAGGGCCTGGATGCGCATTCGTCCACATCGATGCAACCGAGGCCGTTTGGGGCGAGTTGAAACCCGTCTGGGCACAAGCAGTGAAATCGTCCCCTATCCGATTTACACCTGTATTCACACCCAGCATGCTGGCAATAGTCGATTTGGACACATGTCACCTGGTCGGCAACGAGTGCATAACCGTCTTCACATTCACAGCGCGCATCCCCGTTTCCACCGACTACGCAGCGATGGTCGCAGCCCCCATTAGCAAACCTGCAGCCTTGTTTCACAGAGTCACACAACGGACCTGGGGGACTCCAGCCGAAGAAGCCTTCATTAGGCAAGCAATAAGCACTGATTTCATTGTCGGTATTGGCACACTTCACCGTTGCAATAGTCCCGTGAGGTACCATAGGTAAAAAAGCATTGCTGTCGCTTAGGCGAAACGTTGCAAAGGTCAGTGTGTAGTGCACTTCACCCGCCCCTGCCACAGGTATAGTTTTACACATGCCCTTAAAATTAAACTTGCACATATAGCCAGCTGCATCTTTGCAGGAGCTGTCCATCCAACCAAAACTATCACTATTTGGAGGAGACAACACGTAATGTATGGCTACACACCTCTCTTCTGTGCAGGTGCCTGGCGGTTCCACCTCCCAGTTTGAATACGGTGTGTCCGAGCTCCCAGACACCCAGGTAAAGCCTTTCAGAGTTGAATCCGCAGACGTGCACTCGCCCTTTCTCAGCGTCAGTCCAATCCAAAACTTCAAGTCATGACTTGTCTGGCCTTCCCGGATCCGGGACAGCACAGAATTTACCTCCGAAGCTTCTTCATGGCTCTTCACCGTCACCAAGTTCCCCCCGTTGTGTGTGCAATTGTGTTGAGCCTCAGTGAACGTGCTTTTGCGCAGATGTAAAGTGTAACATGCGCTGCCTGTGCACACCGTCTGGTCTGGCTGGTCGGCTGTGCTAACTATACAAAGAGCAGTTTGCAGAAGAAGTAACAAGAACACCATCATCCCCTTCTAAGTGAGTTAACAAATAGGACTTATGTGTAAAATATGTCCTGCTGCATACCGTATTGCCAACCAAGATGTATAAGCAATCAGCATAGCAGGCTGTTGTGTCTCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8357 True 3849 lncRNA 0.30 1 40010411 40014259

Neighbor

gene id symbol gene type direction distance location
AMCG00004245 NA coding downstream 42676 39952121 ~ 39967735 (-)
AMCG00004247 NA coding downstream 58478 39950692 ~ 39951933 (-)
AMCG00004242 NA coding downstream 67644 39934317 ~ 39942767 (-)
AMCG00004243 NA coding downstream 98900 39906269 ~ 39911511 (-)
AMCG00004244 NA coding downstream 128482 39873061 ~ 39881929 (-)
AMCG00004252 NA coding upstream 66339 40080598 ~ 40100982 (-)
AMCG00004253 NA coding upstream 88480 40102739 ~ 40164334 (-)
AMCG00004260 NA coding upstream 154378 40168637 ~ 40173475 (-)
AMCG00004258 LOC106512272,LOC104967796 coding upstream 160313 40174572 ~ 40184290 (-)
AMCG00004259 NA coding upstream 183243 40197502 ~ 40218464 (-)
G6793 NA non-coding downstream 169329 39839168 ~ 39841082 (-)
G6770 NA non-coding downstream 241801 39768409 ~ 39768610 (-)
G6762 NA non-coding downstream 413772 39594941 ~ 39596639 (-)
G6668 NA non-coding downstream 1083389 38926721 ~ 38927022 (-)
G6599 NA non-coding downstream 1393946 38616219 ~ 38616465 (-)
G6822 NA non-coding upstream 975 40015234 ~ 40034323 (-)
G6838 NA non-coding upstream 63758 40078017 ~ 40078283 (-)
G6872 NA non-coding upstream 112289 40126548 ~ 40126792 (-)
G6939 NA non-coding upstream 584695 40598954 ~ 40602815 (-)
G6974 NA non-coding upstream 660912 40675171 ~ 40696315 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other downstream 161288 39841935 ~ 39849123 (-)
AMCG00004203 NA other downstream 2628458 37324010 ~ 37381953 (-)
G6441 NA other downstream 2641589 37367985 ~ 37368822 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other downstream 3223289 36783743 ~ 36787122 (-)
AMCG00004189 NA other downstream 3231349 36769048 ~ 36779062 (-)
AMCG00004302 NA other upstream 2050730 42064989 ~ 42067664 (-)
AMCG00004313 NA other upstream 2362467 42376726 ~ 42531006 (-)
AMCG00004336 NA other upstream 3388694 43402953 ~ 43450255 (-)
G7608 NA other upstream 4506655 44520914 ~ 44522213 (-)
AMCG00004364 NA other upstream 4525904 44540163 ~ 44561575 (-)

Expression


Co-expression Network