G7023


Basic Information

Item Value
gene id G7023
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 40881808 ~ 40883167 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU8593
GTGGACATATAATAAAACTCCGTATACAtacatacccacacacacagaacgATGGTCAAACCTTTTTCACCTGAAAATCTTATTTGAAACCTAAAAAAGGAACCTGTGCACAAAACACTGGcttatgcaaatgtttattaGGACTATGTCAGTATAGACCGGTTTTAAAGTCATTTTACCTACATTTTGTCTAAGAAACTGTAATGCCTTGTAGGATTGTATAGGGAGTTGgctacaaaggaaaataaactaaactaatcgGGTTTACATAAAGTTACACTTCACAAGGACGGGTATTCTGTCAGTGTCAtttcaagacaaattaatgaATGGAATGAAGACAGCGGTGTCACCAGTCTGTATATactaatgagaaaaacaaaaacaaaacagagatggTAATGAAGATTTTTGGTTCCTTTGCtggtgcaaaaaataaaatatacagtacacaatcccacaaaatgtacatttgtggAAACAATATAATTCCAATATTCAACACCGTGGGTTATCCTCAGGAAAGTTACTGGTTGATGAATAGTTTGATTTGCAGACATGATAAAAACAGAAGCAGGAAGGCAGACGAGAGTAAaatcaagtgtgtgtgtgtgtgtgtgtgtgtgttgggggacaTCTCAGCAGATTGATGCACTGGCAGCAGGAGTCACCTGACCTTAAACCAGTGAGACAGCTAGACAAAGGATAAGGAATGTGAACCAGTACAATTGCACTCTGGGAAAGGGTGATGACATGGACAAAAAGATGGAAATACACTGCAAAGCTTGGGAGAAAGGTTATATTTTGAGGAGCAATAGTTGAATTGTAAGTACAATAGCCAATGTGTTTGCTTGCTTCCAAAggatgaataatttaaaatatctgcagTCTGTCCTAGCTGCATTGCTGTACGAGGCATACCTTGAGctttgtccatctgtgtgcgtgtgtgtgtgtgatctagATATTAACTAAGAATCCCTTGCAACTGCTCACCAACTGAAATAATTTTGGTACATTGAAATCTAGATCTGTCGAGTAATCTGAGCATTTTTTCAACTTTTGTCATCTCTCTGGGATCTCTCTTCATGTATCCATTATTCTCTAATTCTTTGATGAAAAGGGAATGCTCAtgagttttaaatttaaacaaaccaaactaaAACCAACCGACTGAATCAATGAACTAAAACTCCTGCATGATGTTTTAAGTGGACAGACTAGCAACCTGCAGCTACAGTGCTGCAGGAACCTGATCAAAAGCAGCATTTTTGACATGTGTGCAACAGACTTATTATGGAAGATagtaaaagcaaaatcaaaccgtga

Function

GO:

id name namespace
GO:0031290 retinal ganglion cell axon guidance biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8593 True 1329 lncRNA 0.47 2 40881808 40883167

Neighbor

gene id symbol gene type direction distance location
AMCG00004270 NA coding downstream 70509 40800935 ~ 40811299 (-)
AMCG00004275 ppp2r5a,LOC106571204,LOC106607584 coding downstream 120919 40729815 ~ 40760889 (-)
AMCG00004272 NA coding downstream 160061 40718598 ~ 40721747 (-)
AMCG00004274 NA coding downstream 166559 40710696 ~ 40715249 (-)
AMCG00004271 NA coding downstream 188021 40666125 ~ 40693787 (-)
AMCG00004279 NA coding upstream 58928 40942095 ~ 40950517 (-)
AMCG00004281 rhag coding upstream 70703 40953870 ~ 40966337 (-)
AMCG00004282 NA coding upstream 102573 40985740 ~ 40994592 (-)
AMCG00004284 tfap2b,LOC107697208,LOC107719371 coding upstream 327224 41210391 ~ 41225185 (-)
AMCG00004283 tfap2d,LOC107690996,LOC107593304,LOC107721448 coding upstream 355260 41238427 ~ 41248474 (-)
G6974 NA non-coding downstream 185493 40675171 ~ 40696315 (-)
G6939 NA non-coding downstream 278993 40598954 ~ 40602815 (-)
G6872 NA non-coding downstream 755016 40126548 ~ 40126792 (-)
G6838 NA non-coding downstream 803525 40078017 ~ 40078283 (-)
G6822 NA non-coding downstream 847485 40015234 ~ 40034323 (-)
G7035 NA non-coding upstream 33282 40916449 ~ 40921474 (-)
G7104 NA non-coding upstream 411009 41294176 ~ 41364065 (-)
G7115 hadha,hadhab,LOC108425650,LOC106603767,LOC105898013,LOC100304971 non-coding upstream 501553 41384720 ~ 41386556 (-)
G7117 NA non-coding upstream 576642 41459809 ~ 41460321 (-)
G7130 NA non-coding upstream 691082 41574249 ~ 41574460 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other downstream 1032685 39841935 ~ 39849123 (-)
AMCG00004203 NA other downstream 3499855 37324010 ~ 37381953 (-)
G6441 NA other downstream 3512986 37367985 ~ 37368822 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other downstream 4094686 36783743 ~ 36787122 (-)
AMCG00004189 NA other downstream 4102746 36769048 ~ 36779062 (-)
AMCG00004302 NA other upstream 1181822 42064989 ~ 42067664 (-)
AMCG00004313 NA other upstream 1493559 42376726 ~ 42531006 (-)
AMCG00004336 NA other upstream 2519786 43402953 ~ 43450255 (-)
G7608 NA other upstream 3637747 44520914 ~ 44522213 (-)
AMCG00004364 NA other upstream 3656996 44540163 ~ 44561575 (-)

Expression


Co-expression Network