G7078 (LOC103376870)


Basic Information

Item Value
gene id G7078
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 41295298 ~ 41364066 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU8658
AATTACTAATTACacacatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccgggctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggtgtgaaaagggaaaaacatccagtatgcggcagtcctgtgggcgaaaatgccttgttgatgctagaggtcagaggagaatgggccgactcATTCAAGCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8658 True 405 lncRNA 0.43 2 41295298 41364066

Neighbor

gene id symbol gene type direction distance location
AMCG00004280 LOC105908978 coding upstream 283540 41000647 ~ 41011758 (+)
AMCG00004278 NA coding upstream 354534 40938585 ~ 40940764 (+)
AMCG00004276 slc30a1a,slc30a1 coding upstream 373824 40906392 ~ 40921474 (+)
AMCG00004277 LOC107712406 coding upstream 390565 40897450 ~ 40904733 (+)
AMCG00004267 lpgat1,LOC106607581 coding upstream 433533 40851231 ~ 40861765 (+)
AMCG00004286 hadha,LOC102787580,LOC102203549,LOC100703423,LOC100304971,LOC106603767,LOC107594700 coding downstream 12802 41376868 ~ 41387623 (+)
AMCG00004289 LOC107593268,LOC107719402,LOC107697206,LOC107721442,LOC107690993 coding downstream 100881 41464947 ~ 41517390 (+)
AMCG00004291 NA coding downstream 179010 41543076 ~ 41550969 (+)
AMCG00004292 NA coding downstream 204343 41568409 ~ 41600974 (+)
AMCG00004293 NA coding downstream 288549 41652615 ~ 41666407 (+)
G7048 NA non-coding upstream 316979 40977999 ~ 40978319 (+)
G6850 NA non-coding upstream 1096336 40148962 ~ 40198962 (+)
G6847 NA non-coding upstream 1181347 40110200 ~ 40113951 (+)
G6840 NA non-coding upstream 1206384 40088608 ~ 40088914 (+)
G6819 NA non-coding upstream 1260975 40015267 ~ 40034323 (+)
G7084 NA non-coding downstream 3079 41367145 ~ 41368478 (+)
G7102 NA non-coding downstream 158987 41523053 ~ 41529308 (+)
G7101 NA non-coding downstream 241044 41605110 ~ 41606759 (+)
G7182 NA non-coding downstream 601948 41966014 ~ 41966233 (+)
G7221 NA non-coding downstream 701431 42065497 ~ 42067725 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 954063 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 3447578 37832623 ~ 37847720 (+)
G6369 NA other upstream 4295140 36999357 ~ 37000158 (+)
G6328 NA other upstream 4403552 36861547 ~ 36891746 (+)
G6314 NA other upstream 4520775 36774001 ~ 36774523 (+)
G7094 NA other downstream 95510 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 846364 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 1324713 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 3254119 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 4597944 45962010 ~ 45968306 (+)

Expression


Co-expression Network