G7084


Basic Information

Item Value
gene id G7084
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 41367145 ~ 41368478 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU8666
TCTCAGTTTATTGTTCCGATATGTTGACTTAAACCTCAGCTATACCTCGTCGCACAAAGACTGGCACACGCAGCAGTTCTGCATGACTACATCCTAGGTATTATGAAGAGTTTTTAATTCATTACTTTTCAGCAGACCCATGACATCTGtattgtgaaattaatctaTGTTATGAGGGAGCCCAAGATTAAACCGCTTGAGAAAACTCAGCCCATTCAGCAGGAAAAACTGGGCGTCCACTTCTGTTATTCATGAGCTCAGCCTTGAGAAGGCACTCTGAACAGACCGTTGATTATACCCTCAGAATACAATTCATTACATAAAGGCAACGTGGCAACAGTATTTACATTGATAAACAGTCCCCACAACACTGGTATTGTAATGtaaccttttctttctttgtaagTGCACTGGAATGGCTCTCTCGGGGGTGTTTCCAAAACCATCTCTCTTCTCTATTTATTGGGGATAAGCTTCCACAATCATAGCATGTCCTACCTGCCCCCCTGCTGCACAGGCAGCAACCAAGGCATACTGGCCTCCCTCCTTCATCAACCTGTGAGCCGCGGTGGTGATCAAACGGCAGCCAGTGGCACCAAAGGGATGTCCCAGGGACAGGGACCCTCCCCAAGTGTTAAACTTCTCCAGAGGGGGGGCACCAAcctaaagaataaatacatacataaatatacatacattacgctgatgcacagacagacaataacttgaaaaataaaaattgcctCCCCTGAAGTACATGCATTACTTTCATCTGACTAAAAGCAAAAGCAGCACAGAGCGCACCACTCCCAAGCACAATTCTGTGAGAAATGACTGTCAACTTTATAACTCATTCGTTTTACCCGCACACCAACAAACACTGTGGTTCTTGGAATACCTAATACAATAGGTTTTCCCCAATTTCAACCGAATAGCTTCAAACGATcaacatcataaaaatgctaaCGACGCTACCATGCAAACATGTCCAATAGCTGCTAGTGCCTTTAAATTAAACCTCACATACAACAAGAACAATGagtataaacattattattaattatagagCGTTTTTCATAGGCCTCATCTGAAAGAGCAAAACCATAAgaaaagttaaatacatttaccttgGATTTCCTGCCCATATATGTTTGGGCAAACCAGTCAGAGTCCAAGGCTTTAAAGTTAGCCATAATTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8666 True 1200 lncRNA 0.40 2 41367145 41368478

Neighbor

gene id symbol gene type direction distance location
AMCG00004280 LOC105908978 coding upstream 355387 41000647 ~ 41011758 (+)
AMCG00004278 NA coding upstream 426381 40938585 ~ 40940764 (+)
AMCG00004276 slc30a1a,slc30a1 coding upstream 445671 40906392 ~ 40921474 (+)
AMCG00004277 LOC107712406 coding upstream 462412 40897450 ~ 40904733 (+)
AMCG00004267 lpgat1,LOC106607581 coding upstream 505380 40851231 ~ 40861765 (+)
AMCG00004286 hadha,LOC102787580,LOC102203549,LOC100703423,LOC100304971,LOC106603767,LOC107594700 coding downstream 8390 41376868 ~ 41387623 (+)
AMCG00004289 LOC107593268,LOC107719402,LOC107697206,LOC107721442,LOC107690993 coding downstream 96469 41464947 ~ 41517390 (+)
AMCG00004291 NA coding downstream 174598 41543076 ~ 41550969 (+)
AMCG00004292 NA coding downstream 199931 41568409 ~ 41600974 (+)
AMCG00004293 NA coding downstream 284137 41652615 ~ 41666407 (+)
G7078 LOC103376870 non-coding upstream 3079 41295298 ~ 41364066 (+)
G7048 NA non-coding upstream 388826 40977999 ~ 40978319 (+)
G6850 NA non-coding upstream 1168183 40148962 ~ 40198962 (+)
G6847 NA non-coding upstream 1253194 40110200 ~ 40113951 (+)
G6840 NA non-coding upstream 1278231 40088608 ~ 40088914 (+)
G7102 NA non-coding downstream 154575 41523053 ~ 41529308 (+)
G7101 NA non-coding downstream 236632 41605110 ~ 41606759 (+)
G7182 NA non-coding downstream 597536 41966014 ~ 41966233 (+)
G7221 NA non-coding downstream 697019 42065497 ~ 42067725 (+)
G7231 NA non-coding downstream 719313 42087791 ~ 42089653 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 1025910 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 3519425 37832623 ~ 37847720 (+)
G6369 NA other upstream 4366987 36999357 ~ 37000158 (+)
G6328 NA other upstream 4475399 36861547 ~ 36891746 (+)
G6314 NA other upstream 4592622 36774001 ~ 36774523 (+)
G7094 NA other downstream 91098 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 841952 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 1320301 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 3249707 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 4593532 45962010 ~ 45968306 (+)

Expression


Co-expression Network