G7101


Basic Information

Item Value
gene id G7101
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 41605110 ~ 41606759 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU8686
tttttttatgaaaaaggtctataaattataaatctatatataaatatatttcatgtttgtttgtttcatttgcatCGGTTTTGTTTGAAAAGTGAAACTAGATGGTACATTAGTATAAATCATGGCATGAGTGTAGTCCACTCTGAAAGTTTTAAATTACTCTGAGAACTAACGTGGTCACTAGTtggaaacaaagacatttctcTCCAGTGCCCTCCCTCCCATTGCTAGCACTTTGTTTCCTACAATGCTGGTCCTCTGCGGCATTGGTCCACAAAGCACAGTTCCTTAGAGATTCCTCACTGGAGAGAACGGAGGAATCCCAAGGCGTGCTATTGTGGATGTCAAGAGTCATTTAAAATGCCTTCTTGATGGTTAAAACAGGATGATTCTTTCTTTGACCCAACCTACagtcatttctgtttatttccacAATTATGGAAATGAccagaaattacatattttaaaacatgagaGTGTGAGCTCTTGTCAGCTATTTTATAACTGATATGAAACAGCATATTTCAGACAATGGCTTCATACATGAATTTGCAGGAAGTCAGACAACTGTGGTAAACACTGCatcttcctgttttgttttataggcTCTATATTATCAGTTACCTTGTTAGGTATAGACCTGACCATTTTTAAAGTTATGTACAGTTATTCCAATTTGAGAAATCATATGTCTGagtacatgaatacattttatttctgtttttagatGTTAAAAGTACACTTTCTCCTCCGAAACTGAGATGTCTTTGAAGGAATTgtataaaatagattttctctTAAGATTTGTTGTCGAATAAATGTGTATCTATGATGACCATTTGAAATGGAAACTCTCCAGACCCGATTTACTCAATATTTTACCTGgaaatgtgtgattttcaaAGTAGATACTACtttgtcagtttttgttttcattgtcttGCCAAAGTCTTCGCTGTAATGGTTTAGATTCCTGCCTGGGCGATACATTGAACTTTGCCTTTAGTTTGAACAAATATGTGACAATGTACTTACGATACTCagctttgcttttaatttgaaattgagaATTTCCCACATTTTGGACTTGTCCTGGGATGAGGTTTCCACCAAGTGCATTggtcaaatattaaaacacaaatgtagcaatctattttaatactttatagTCCAGCATTCACTCTTCTgatctgtcttgtttttctcagtTAGGGTGTTCCATAGAGCCACAACATTGTTTCTCACAGCTTGGCCTGGTTCTAGTCCTACCAGggacattaaatatttgaaatttctcataaaaacatgtattgttagTCCACCTTTTAATATGAGACTGGAACTCAGTGAAAATTGCGTATTCACTCCTGAAGAAATGAGGAAATGGGAggtgtgttattttttaacaatttagTTATACTACAGATAACAGTGTATAACTGTTCAAGGGTgatggtgtgtttgtgtgtgagcttTGTCCTTTTTAGTCCATGTAGTCAATTTTTCCCCAGCTCCAGTGAGAaaattctttatttctgttcGTGtcttattacagttttttatttcttgaaaaactacttgtttaaaacaaaacgaaaaaaaGAATGTAAAATAGTAATCAGCACCtgtaaaaaaattgtattttatcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8686 True 1650 lncRNA 0.34 1 41605110 41606759

Neighbor

gene id symbol gene type direction distance location
AMCG00004292 NA coding upstream 4136 41568409 ~ 41600974 (+)
AMCG00004291 NA coding upstream 54141 41543076 ~ 41550969 (+)
AMCG00004289 LOC107593268,LOC107719402,LOC107697206,LOC107721442,LOC107690993 coding upstream 87720 41464947 ~ 41517390 (+)
AMCG00004286 hadha,LOC102787580,LOC102203549,LOC100703423,LOC100304971,LOC106603767,LOC107594700 coding upstream 217487 41376868 ~ 41387623 (+)
AMCG00004280 LOC105908978 coding upstream 593352 41000647 ~ 41011758 (+)
AMCG00004293 NA coding downstream 45856 41652615 ~ 41666407 (+)
AMCG00004294 dtnb,LOC108412184,LOC106603664 coding downstream 98351 41705110 ~ 41730436 (+)
AMCG00004295 NA coding downstream 222980 41829739 ~ 41852260 (+)
AMCG00004297 LOC106603656 coding downstream 289492 41896251 ~ 41916088 (+)
AMCG00004296 NA coding downstream 342612 41949371 ~ 41964474 (+)
G7102 NA non-coding upstream 75802 41523053 ~ 41529308 (+)
G7084 NA non-coding upstream 236632 41367145 ~ 41368478 (+)
G7078 LOC103376870 non-coding upstream 241044 41295298 ~ 41364066 (+)
G7048 NA non-coding upstream 626791 40977999 ~ 40978319 (+)
G6850 NA non-coding upstream 1406148 40148962 ~ 40198962 (+)
G7182 NA non-coding downstream 359255 41966014 ~ 41966233 (+)
G7221 NA non-coding downstream 458738 42065497 ~ 42067725 (+)
G7231 NA non-coding downstream 481032 42087791 ~ 42089653 (+)
G7272 sod2,LOC102787761 non-coding downstream 726666 42333425 ~ 42336643 (+)
G7278 NA non-coding downstream 758109 42364868 ~ 42365654 (+)
G7094 NA other upstream 97879 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 1263875 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 3757390 37832623 ~ 37847720 (+)
G6369 NA other upstream 4604952 36999357 ~ 37000158 (+)
G6328 NA other upstream 4713364 36861547 ~ 36891746 (+)
AMCG00004304 NA other downstream 603671 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 1082020 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 3011426 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 4355251 45962010 ~ 45968306 (+)
G7999 NA other downstream 6540129 48146888 ~ 48147156 (+)

Expression


Co-expression Network