G7104


Basic Information

Item Value
gene id G7104
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 41294176 ~ 41364065 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU8689
GCTTGAATgagtcggcccattctcctctgacctctagcatcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagcccggcccgtctggcaccaacaaccaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatgtgtgtatatatatatataagtatgaCTTGGTAATTTGCTCTTGTGTATCCTCAGCACAGTCTGGC
>TU8690
GCTTGAATgagtcggcccattctcctctgacctctagcatcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatgtaatgATAATA
>TU8691
GCTTGAATgagtcggcccattctcctctgacctctagcatcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagcccggcccgtctggcaccaacaaccaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatgtgtCTGTGTTTCAGCTGTGATT

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8689 True 390 lncRNA 0.44 2 41363613 41364065
TU8690 False 326 lncRNA 0.41 3 41294176 41364065
TU8691 False 347 lncRNA 0.45 3 41305701 41364065

Neighbor

gene id symbol gene type direction distance location
AMCG00004283 tfap2d,LOC107690996,LOC107593304,LOC107721448 coding downstream 45702 41238427 ~ 41248474 (-)
AMCG00004284 tfap2b,LOC107697208,LOC107719371 coding downstream 68991 41210391 ~ 41225185 (-)
AMCG00004282 NA coding downstream 299584 40985740 ~ 40994592 (-)
AMCG00004281 rhag coding downstream 327839 40953870 ~ 40966337 (-)
AMCG00004279 NA coding downstream 343659 40942095 ~ 40950517 (-)
AMCG00004285 NA coding upstream 2736 41366801 ~ 41374949 (-)
AMCG00004287 NA coding upstream 23724 41387789 ~ 41426392 (-)
AMCG00004288 rab10,LOC102798439 coding upstream 74835 41438900 ~ 41442184 (-)
AMCG00004290 NA coding upstream 105299 41469364 ~ 41473040 (-)
AMCG00004306 otof coding upstream 737624 42101689 ~ 42108599 (-)
G7035 NA non-coding downstream 372702 40916449 ~ 40921474 (-)
G7023 NA non-coding downstream 411009 40881808 ~ 40883167 (-)
G6974 NA non-coding downstream 597861 40675171 ~ 40696315 (-)
G6939 NA non-coding downstream 691361 40598954 ~ 40602815 (-)
G6872 NA non-coding downstream 1167384 40126548 ~ 40126792 (-)
G7115 hadha,hadhab,LOC108425650,LOC106603767,LOC105898013,LOC100304971 non-coding upstream 20655 41384720 ~ 41386556 (-)
G7117 NA non-coding upstream 95744 41459809 ~ 41460321 (-)
G7130 NA non-coding upstream 210184 41574249 ~ 41574460 (-)
G7131 NA non-coding upstream 218396 41582461 ~ 41582767 (-)
G7135 NA non-coding upstream 223134 41587199 ~ 41587456 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other downstream 1445053 39841935 ~ 39849123 (-)
AMCG00004203 NA other downstream 3912223 37324010 ~ 37381953 (-)
G6441 NA other downstream 3925354 37367985 ~ 37368822 (-)
AMCG00004188 srp9,LOC107553440,LOC107601484 other downstream 4507054 36783743 ~ 36787122 (-)
AMCG00004189 NA other downstream 4515114 36769048 ~ 36779062 (-)
AMCG00004302 NA other upstream 700924 42064989 ~ 42067664 (-)
AMCG00004313 NA other upstream 1012661 42376726 ~ 42531006 (-)
AMCG00004336 NA other upstream 2038888 43402953 ~ 43450255 (-)
G7608 NA other upstream 3156849 44520914 ~ 44522213 (-)
AMCG00004364 NA other upstream 3176098 44540163 ~ 44561575 (-)

Expression


Co-expression Network