G7231


Basic Information

Item Value
gene id G7231
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 42087791 ~ 42089653 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU8872
gtgtgtgtgttgttgttttttttttgggaccTGACATTTAATTTCAGGAAATTCAAACCCCTTGTCATGTTGAATTCCTACAGAATTTGCCCATCATCCAGCACTACTGCATTTAAGCTAAATGGCCTTTTTTGCCATTCTGTATTGCTGTCGTTGTGACACAAATGTGTCATGATGGTTATACATGTTCATTCACTTGAATCTGATAGTCCTGCAGGTGCACTTGTCGACTAATTCTGTTCTACCTCAAGGTGTCTTTGTGCAGAAGCTACAGCTTGTAAAAGACAGTTAATCTTATAGTgggaataatatattttgtttgcttgagCCCCCCCAGTTTTTATCACCAGGACCATCAACATTAAAATAGGGATTCACTTTTCCCTTGAAAGCAGCTGTTTCCCCCCTCCAATCCACTTTTGATTTACAGTTAATGTGTGCAGTCCCGCAGCATTGAGCAGTGGCACTCCTGCACTCATGAGATCTTTAAATCCTATTGCTAACATTTTGCCAGACCAAATGCACATTATAACTTCATCCACAAgtgcatgttttctttctttgtttgacaatacatttacagtgctattttaaaaataaaatatgattcaaGTACTGGATCACATACATATTTGTAGTCCTTCCGTTGCCCATTCCTGTAGCATTGTCAATGTGTATTGTGGTGTGTACATGTCTGAGCCATACAACGCTGTGCTCCTGCCATTGCATTGCCATGTGTTTCTGGTCTAATACATGTGCTGAAACAAAAGATGtatatgttgtaaaatgtaacgCACAGTCTGATAATAGGCTGCAATACATGAACCTTCAATGCTTACAGGTTGGGATGAACTGTGTTGCTTATTTTAACGGCTTTATTCCCATTATCAGTTTTTCCTCAGGGTCAGACAGTGCTCTGAGAATGTATGTACTTCATAGTCCAATCCCTATTGTACTGTTACTAACATATTGTACGCATCACATTTTGACTACACAGTATTTGTAGCCCTTACAGTAGTGGTTCAGTGTTTCTAATAAGACTGAATGTCAATGAAACCAGTCTATTTCGCGGTTTCTTATGCactgaataaatgttttgtttggtaGTACTTTTTTCCGTTCAAACTGAAGACTAAAAAAGGTATGTGATGGTGCAGAAACTGCACCGTACTGCCAAGCCATGGCTAATCAAACCTGatttcaccccccccaccacaccccTCTTTATGTTTGAATGTGCTTCAGACTTAACTATTTGGTGCAGTTTAGTACCCGTGTACAGCCTATGTGGGACCATTCATCGGCTCTGGTACCTCTTCACTGCAAATTTCTAAAGATGATTATTCTTATGTGATTTTATattggggagggggtgggggggttaggCTGCCACAGCTGCATtagtacaatattatattacacaAATCTACACGGGGTTCTTCACTGTAAAGGATCACTGTCACAGAAGCATTCTGTAGcaggttttaaatgtgtaaatgccgtgtcattgtttgttttaatggccTAACATTCAAACTTCAATAAAGGTGGAAAATAAGATGTGCGTCTCCCCTAGTCACTGAAATTCTGTTCTCCAGATACTGGCTATGCagcagcattatatatatatatatattttttgtttttttgtttgtttgtttgttttgttttgtttggtgaGCTGgagaaagttttttgttttaaatgtgattaaGGTATTATTTTTTGGACATTTGTGCACAATCAGTTATAGAGACATTGTGCTTGTATGTTGTGTAGACTATGCATGCctacaatattacaaataaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8872 True 1812 lncRNA 0.53 2 42087791 42089653

Neighbor

gene id symbol gene type direction distance location
AMCG00004300 NA coding upstream 3949 42069528 ~ 42083842 (+)
AMCG00004301 NA coding upstream 22380 42047643 ~ 42065411 (+)
AMCG00004298 LOC104961504,LOC106608390 coding upstream 42700 42029377 ~ 42045091 (+)
AMCG00004299 mapre3b,LOC107392001,LOC100704238 coding upstream 63051 42010685 ~ 42024740 (+)
AMCG00004296 NA coding upstream 123317 41949371 ~ 41964474 (+)
AMCG00004303 NA coding downstream 218 42089871 ~ 42098322 (+)
AMCG00004305 NA coding downstream 130367 42220020 ~ 42259741 (+)
AMCG00004309 wtap,LOC105015380,LOC100196682 coding downstream 248861 42338514 ~ 42347082 (+)
AMCG00004308 acat2,LOC107696107,LOC107726488,LOC107732634,LOC107601581,LOC107693222,LOC107549121,LOC102788057 coding downstream 260578 42350231 ~ 42355400 (+)
AMCG00004314 NA coding downstream 458687 42548340 ~ 42576558 (+)
G7221 NA non-coding upstream 20066 42065497 ~ 42067725 (+)
G7182 NA non-coding upstream 121558 41966014 ~ 41966233 (+)
G7101 NA non-coding upstream 481032 41605110 ~ 41606759 (+)
G7102 NA non-coding upstream 558483 41523053 ~ 41529308 (+)
G7084 NA non-coding upstream 719313 41367145 ~ 41368478 (+)
G7272 sod2,LOC102787761 non-coding downstream 243772 42333425 ~ 42336643 (+)
G7278 NA non-coding downstream 275215 42364868 ~ 42365654 (+)
G7288 NA non-coding downstream 286972 42376625 ~ 42379961 (+)
G7293 NA non-coding downstream 385923 42475576 ~ 42475886 (+)
G7418 NA non-coding downstream 1146165 43235818 ~ 43237653 (+)
G7094 NA other upstream 580560 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 1746556 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 4240071 37832623 ~ 37847720 (+)
G6369 NA other upstream 5087633 36999357 ~ 37000158 (+)
G6328 NA other upstream 5196045 36861547 ~ 36891746 (+)
AMCG00004304 NA other downstream 120777 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 599126 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 2528532 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 3872357 45962010 ~ 45968306 (+)
G7999 NA other downstream 6057235 48146888 ~ 48147156 (+)

Expression


Co-expression Network