G7329 (fabp7,LOC108247051,LOC104945778)


Basic Information

Item Value
gene id G7329
gene name fabp7,LOC108247051,LOC104945778
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 42688779 ~ 42691109 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9000
tataGCAGGTTCAGGTAGTTTATTCAGTCTGTTGTGCACAGGTTCACAAATGAGAATTTAAGTACAAAACCAAATAGAAGTGCGTAACAGATTTTGATAtaaaagttgcttataaaaacatttttttccaactcATGTTATAAAACATTTGGGCAGATGAAGTGCAAATCTATGCAAACAGTAAACGACAACATCAAATACGATTGCTGTCTGCAGTCCAGCGGGCAGGACTGAAATGGTCCCATGAGACAGAGAGCTTTGAGCAGACCTTATGCCTTCTCATAAGTACGCACTGCCTGGACATCACCGAAAGACAGATCATGATCAATTTGCCGTCCTTGATCTCTCTGACAAACTTGGTCTCCTTGCCGTCCCACTTCTGCACATGCACCAGCTTGTCTCCGTCCATGGATACAGTGGATTGCAGTTCCTGTCGTCTGCAGTAGATTCATCGAACTCCTCTCCAAGTTTGAAGgaaatttctgtatttttgaaagtaCTCTGCGTTTTTACAACAACCTTGTCTCCATCCTGGCTGATGATGATAGTGGGTTTAGTGACGTTGCCGACTTGTCTTGTTGCAAAACCAACCCCCAGCGCTTTCATGTACTCGTCAAAGTTCTGACTGTCGACCAGTTTCCAGGTGGCACAGAAGGCGTCGACCATGGTTGCAGATGTAAGGAAATGCTGGGAGCAGAAGTGCTGAGGTAAAGGTTGATATGAAGTTGCTCAGAGGTACAGTATCTGTATGCAGCGTCCCTGGGCAATATCGCGCTGTCTATCATTAATACCCGGGGAGGG

Function

symbol description
fabp7 Predicted to enable lipid binding activity. Predicted to be involved in negative regulation of cell population proliferation and nervous system development. Predicted to act upstream of or within cell proliferation in forebrain; neurogenesis; and prepulse inhibition. Predicted to be located in several cellular components, including cell projection; cell-cell junction; and neuronal cell body. Biomarker of glioblastoma.

NR:

description
PREDICTED: fatty acid-binding protein, brain

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9000 True 801 TUCP 0.45 4 42688779 42691109

Neighbor

gene id symbol gene type direction distance location
AMCG00004315 NA coding upstream 53811 42591866 ~ 42634968 (+)
AMCG00004314 NA coding upstream 112221 42548340 ~ 42576558 (+)
AMCG00004308 acat2,LOC107696107,LOC107726488,LOC107732634,LOC107601581,LOC107693222,LOC107549121,LOC102788057 coding upstream 333379 42350231 ~ 42355400 (+)
AMCG00004309 wtap,LOC105015380,LOC100196682 coding upstream 341697 42338514 ~ 42347082 (+)
AMCG00004305 NA coding upstream 429038 42220020 ~ 42259741 (+)
AMCG00004318 serinc1,LOC107598085,LOC107716862,LOC107675084 coding downstream 41707 42732816 ~ 42736569 (+)
AMCG00004321 NA coding downstream 235959 42927068 ~ 42975785 (+)
AMCG00004326 NA coding downstream 422575 43113684 ~ 43114271 (+)
AMCG00004328 man1a1,LOC107833082,LOC106959811,LOC103360425,LOC107083523 coding downstream 465959 43157068 ~ 43177059 (+)
AMCG00004327 man1a1,LOC102782693,LOC106607779 coding downstream 524997 43216106 ~ 43234293 (+)
G7293 NA non-coding upstream 212893 42475576 ~ 42475886 (+)
G7288 NA non-coding upstream 308818 42376625 ~ 42379961 (+)
G7278 NA non-coding upstream 323125 42364868 ~ 42365654 (+)
G7272 sod2,LOC102787761 non-coding upstream 352136 42333425 ~ 42336643 (+)
G7231 NA non-coding upstream 599126 42087791 ~ 42089653 (+)
G7418 NA non-coding downstream 544709 43235818 ~ 43237653 (+)
G7441 NA non-coding downstream 655241 43346350 ~ 43346959 (+)
G7485 NA non-coding downstream 900641 43591750 ~ 43595078 (+)
G7569 pvrl1b,nectin1,LOC107563312,LOC107758086,LOC107691861,LOC107670612,LOC107561861 non-coding downstream 1387236 44078345 ~ 44088037 (+)
G7584 NA non-coding downstream 1645342 44336451 ~ 44336681 (+)
AMCG00004304 NA other upstream 472417 42210430 ~ 42216362 (+)
G7094 NA other upstream 1181548 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 2347544 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 4841059 37832623 ~ 37847720 (+)
G6369 NA other upstream 5688621 36999357 ~ 37000158 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 1927076 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 3270901 45962010 ~ 45968306 (+)
G7999 NA other downstream 5455779 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 6206008 48897117 ~ 49026355 (+)
G8099 NA other downstream 6241341 48932450 ~ 48934095 (+)

Expression


Co-expression Network