G7419


Basic Information

Item Value
gene id G7419
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 43235818 ~ 43237610 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9118
acaaatataattattaaaaatttTGCAGCTCATTTTTATCATTTAGTCAGTAACGTCATaggatttatataaatgtaggCATATTTGCCTGTAtggaatatgtacattttaaaaacaggaaaacaaacaaacaaaaacaatccccACAGATTAAATTGCATATCAACAAAAAGACAATGGAATGATTATCAGCAATTTTGTACAGTTACATCTTGTCACAAACCATAAACGAGTTCACACAAAAAAGGCTTCTTCACGTAGGATTCCTCTTTACgttcaatttgaaattaaaagcacactttctgtttttattttcaacaaagaTGCAAGGAAATGACTTGTTAATGTGCATTATAGaacaatattttcagtttatctGCCAATAACTCCCAGGCTCATTCAGCAGTTCACCCCTGcatgcaatattttaatatcactcgaGACCTGTTTCATGAGGTGATTATCCAGTAAAAGATGCCTTTAAAGGAACatccaaaaataaaaggattaaatatgaaatatgaaaatgagaaaatcaaaaacacactGACGAGACACTGTTATAGAGCAAGAACAGTAACCTCTTCCCTTCCAGTGAAGAACAGCAACTGATGCAGCACGGCTGGCAGTACGCAGGGCTGACCTCCGCATTACACCTCGTGAACACAGAATACCTTCCGAGACAGTACATTTACACGGGAAACAAACCGAGGATGACTAAAATAACTGCATGTACTGTACATTCAATGATGCATAAAACTAAccacaacaaataaaaccaattattttcattaaaaatgtcaaaagaaaCACCCCAAAAACGGGAGATGTGAGGCTGTAATCTTCCCCAGAGGTAACACAGCACCTGCACCGACTAACTATGCTTTGACTTAAGTCAGATGTCTGTTATGTTTCTGAGTATCATGCCTGTGGCTCGAGGCCCGCTCAGTCTGCGGTCAGTGCTTGAGTTAAAGAGCCCAGAGGAGGTTTAAGAGTTTTATTGCCCCTCAGCATATATTACCATGTCTTTTACACAGCATATATTGGAATAATTTAACAGTTAATCCAGTGTAGAACAGCGACAGTTTAAGTACTTACTCTCCTTGCATCTTTTTTATACGTTTCGTGTTATAATTCCTGCTTGTGCTTATTTTAAACTGACTAGAATACCTTCCTATGACAAACCAcgattaataaaaataagaaaaccagCATTTTGTGCTTTCtaggaaagagagagatagagagaaaattaaaaaggcaaaattCCATTCAGTTTCACATTTGAAGAGTCATTTGCACTGACATTCGTTCATTAAATTGACACTTCCCTCTGCACTCACCATTAAGACGGTGATAAACTTTAACACACCTTCCAAAGGGAAACCCACCAAAGGTACTCCGAACTAAACCTATgtgcattcaaataaattaaaaacaataatttgcaTAAAACAGAAAGTACAATATAAACCCAACTTGATTAATTACCACCACCCACGACTGtcctaaaacaaaataacagacaCTTAACACTGCTCAGTTGTGAAGCAAAAACTCTCTGAAATCGACATCTGACAGAACAAAGCACACCTACATCTGctgaaaatacatgtaaatggcTTAGTTGTTGATAAAATGATCAATATAAGTGGCACAAACAATTTACATTCTTGGGAAGATGGGATGAAATAAGCAGGAACTCGAGTCCCCTCACTAATACGAGCCACGAGAAGTCCAGGATCTCTCAGAGAGGATGTATTTTCTTGCGTATAGGAAATGCGGGGATGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9118 True 1793 lncRNA 0.37 1 43235818 43237610

Neighbor

gene id symbol gene type direction distance location
AMCG00004325 NA coding downstream 200540 42975752 ~ 43035278 (-)
AMCG00004322 NA coding downstream 310019 42922676 ~ 42925799 (-)
AMCG00004324 NA coding downstream 315624 42914142 ~ 42920194 (-)
AMCG00004323 LOC107675226,LOC107602186,LOC105017938,LOC107716890,LOC107697125,LOC107598086 coding downstream 333935 42901035 ~ 42901883 (-)
AMCG00004319 hsf2 coding downstream 483001 42738503 ~ 42752817 (-)
AMCG00004333 NA coding upstream 229559 43467169 ~ 43485249 (-)
AMCG00004337 slc35f1,LOC107727669,LOC107678858,LOC107743307,LOC107697151 coding upstream 247659 43485269 ~ 43514436 (-)
AMCG00004334 slc35f1,LOC107697151,LOC107678858,LOC107743307,LOC107549682 coding upstream 282369 43519979 ~ 43539410 (-)
AMCG00004339 NA coding upstream 355543 43593153 ~ 43604125 (-)
AMCG00004341 NA coding upstream 368259 43605869 ~ 43608735 (-)
G7336 NA non-coding downstream 497968 42725912 ~ 42737850 (-)
G7335 NA non-coding downstream 516127 42692754 ~ 42719691 (-)
G7270 NA non-coding downstream 922700 42312919 ~ 42313118 (-)
G7268 NA non-coding downstream 970841 42264690 ~ 42264977 (-)
G7259 NA non-coding downstream 1015634 42219958 ~ 42220184 (-)
G7554 NA non-coding upstream 630853 43868463 ~ 43868706 (-)
G7580 NA non-coding upstream 845487 44083097 ~ 44089780 (-)
G7583 NA non-coding upstream 940036 44177646 ~ 44177988 (-)
G7585 NA non-coding upstream 1098661 44336271 ~ 44336570 (-)
G7587 NA non-coding upstream 1170750 44408360 ~ 44408665 (-)
AMCG00004313 NA other downstream 704812 42376726 ~ 42531006 (-)
AMCG00004302 NA other downstream 1168154 42064989 ~ 42067664 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other downstream 3386695 39841935 ~ 39849123 (-)
AMCG00004203 NA other downstream 5853865 37324010 ~ 37381953 (-)
AMCG00004336 NA other upstream 165343 43402953 ~ 43450255 (-)
G7608 NA other upstream 1283304 44520914 ~ 44522213 (-)
AMCG00004364 NA other upstream 1302553 44540163 ~ 44561575 (-)
AMCG00004372 LOC108423781,LOC105921217 other upstream 1385580 44623190 ~ 44712051 (-)
G7868 NA other upstream 3069316 46306926 ~ 46307319 (-)

Expression


Co-expression Network