G762


Basic Information

Item Value
gene id G762
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 4545898 ~ 4547298 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU915
TAGATTACAATTTCTCCATACAGTTCAAACCTAACAgtatgaaaacatgtatttttgttattattgttactcTCATGATTATGTATAGGTTTGAACTGAAAACCAGGGCAACATGCAACGTGTCAGTAGGCAGTATTTAACACACATGCTGAAGTTACAAGTTTGAGGAGATTTATCCCTACAGAATATATACAACCCTCCTCACTATGAATGGATATTGTAATTAGCCAGTACTTGAAAGTGTTGATGACTTATTTATTCTCCAGATCAGTTTCATTCACACAGCTTGTTTGCCATTCTGAGGAGTCTGACCCTAGCAGCGATAGGTTCACCATATTTCATGAATTTCGCGAAGCCTTTGTTGAGTGACAAAATGTACTTTGCAGTTTTTCTTGACTTGTAATAATGAACAGCAGATTTGTAAGTCTATAACTACCGTACTCTATCTTTGTAGTGCTTTACAAGAACTGATGCcaaaacaaagcattcaaaACTATGATGTCAATGCAGGTTATGACAATGTTGAAGAAATACACCAAGAATGTACTAACAATGTGTTACGAATTATGgttagtttatattttttaatgaatataggTGAATGCACTCAGCACTTATGATGCTGTTgtagttattgttattgttgttttctgtttggttttgtaACAAAAGAGGTCGATCTTAACGCTAGCCTGCTAGCCACTGGCTAGTGCAGATCGCTGTGGGCCAGTACAGATTCTCTAGAACTAGTCCGTGTGGCTAGTGCATATTATCTTACGTTTTAGAGCTGTTAAGATTGAAATctacagattttaaaacaacaagctTATGATCGGATCAGAGGGCAAACGATGGCATTGTAGCTAGTCtcacactacacgaccatcggTAGCATGGACGGGCCCCAACCAGGCTGCTAGTcatgacgatcagtgccgatttGTCGTCAGGGCAAATCGGGCTCAAATcaggcttaaaatcgtgtagtgtgaccatAAATGTACTGGAAACGATCGCTACTCGCACATGTCAAGGTGTAATCTAATGCACCACTTGCAGCAGAcgacttcttaataataaatattacagttcAGCCCAAATGGCAGCTGGAATTTGAATATTCTGTAtttcatgtgttttaagtgGTATTGTTCAAATACAGCACATTTGGAAGCCTGAATGATGCAGCAAATTGACAAAACATTGAGTGACAGtgagtgcaaattaaattagaaaaccTAACTCATGCATCAGGTGGTTaagttcaaacattttttaaccTTGAAGCATTCCATTTACAAAGCAGTAAGCAGGTGAAAATCATACACTcagttgtataaaataaaatgacaggaaTTTTCACAGGCACCCAACAGAAATACTTCCACTGGGTTATATTGG

Function

GO: NA

KEGG:

id description
ko00600 Sphingolipid metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU915 True 1401 lncRNA 0.44 1 4545898 4547298

Neighbor

gene id symbol gene type direction distance location
AMCG00003470 NA coding downstream 22900 4521548 ~ 4522998 (-)
AMCG00003466 snx17 coding downstream 141256 4376892 ~ 4404642 (-)
AMCG00003462 LOC108435005,LOC103398676,LOC105028620,LOC107697317 coding downstream 221920 4299905 ~ 4323978 (-)
AMCG00003460 NA coding downstream 310246 4218169 ~ 4235652 (-)
AMCG00003464 NA coding downstream 333996 4209747 ~ 4211902 (-)
AMCG00003472 NA coding upstream 315 4547613 ~ 4553234 (-)
AMCG00003471 NA coding upstream 15103 4562401 ~ 4565560 (-)
AMCG00003477 NA coding upstream 332522 4879820 ~ 5154595 (-)
AMCG00003479 NA coding upstream 643251 5190549 ~ 5225471 (-)
AMCG00003482 NA coding upstream 810288 5357586 ~ 5358050 (-)
G748 NA non-coding downstream 24881 4520815 ~ 4521017 (-)
G744 NA non-coding downstream 59872 4485607 ~ 4486026 (-)
G743 NA non-coding downstream 60333 4483516 ~ 4485565 (-)
G708 NA non-coding downstream 219048 4282149 ~ 4326850 (-)
G707 NA non-coding downstream 229614 4281825 ~ 4316284 (-)
G777 NA non-coding upstream 232548 4779846 ~ 4783376 (-)
G786 NA non-coding upstream 434721 4982019 ~ 4982220 (-)
G804 NA non-coding upstream 584169 5131467 ~ 5131701 (-)
G811 NA non-coding upstream 585402 5132700 ~ 5140245 (-)
G844 NA non-coding upstream 782274 5329572 ~ 5329774 (-)
AMCG00003459 NA other downstream 650374 3876232 ~ 3895524 (-)
AMCG00003444 NA other downstream 1006931 3536172 ~ 3538967 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other downstream 1115626 3394657 ~ 3430272 (-)
AMCG00003422 NA other downstream 2107077 2427397 ~ 2438821 (-)
AMCG00003423 NA other downstream 2144003 2397642 ~ 2401895 (-)
AMCG00003476 NA other upstream 35844 4583142 ~ 4808989 (-)
AMCG00003484 NA other upstream 796772 5344070 ~ 5356468 (-)
AMCG00003550 NA other upstream 4461819 9009117 ~ 9082850 (-)
AMCG00003572 NA other upstream 5305901 9853199 ~ 9865649 (-)
AMCG00003573 NA other upstream 5327372 9874670 ~ 9878444 (-)

Expression


Co-expression Network