G7638


Basic Information

Item Value
gene id G7638
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44574331 ~ 44574997 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9402
aAAACATTTGCTCATAATCAGTGAATCGGCCGCTACAATTACTTTTATTCCACAGTGCCTGGGAGCAAAACTgctaacattttttaaatcgaTCTATTGCAGTAACATTCCCTGACCAGCACTTCCCAGTTTCTCCACCTGAGGCCACCCTTGCCACAGTCATAACAAGCCCTTTTTTCCACTCTCCCATTTCACTCACCTAATTATTGGATTATCACCCGGTGCCAGAGTCTATTAACTCACCTGATTCTCTTCTCTTGCTCATCACCATTATCTATATATTCCCCTCAGTGACAGCCCAGTAGTACTTGGTCTTGGTTTGCTATCCTGCTACATTTCTAAACCTCTCTGCTAGTATTTTGCCTTTTGTGTGTTTAGACCTTTTGCCTGTCCCCTTGCCTTATGATTTGGGGATTTTCTGCTCaaacctgtttgcctgatcgttGACCTTTTGCCTGCCTTTAGACTATGACTTTGGATTCTTTCTATTGCACTATTTACTGGTATTTGACCCTCAACTTGTTTCCTGACATGCCACGCTTCTTTGTATTTCACCCCGCACCTGGGTCCTCAACCCCTGGTTCCTGGCTAACAATTGCATTGCATACAGTACAGCATACAGcacttacaaaaacaataatgaagacCATTAAAGAAAgattcaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9402 True 667 lncRNA 0.42 1 44574331 44574997

Neighbor

gene id symbol gene type direction distance location
AMCG00004352 NA coding upstream 22198 44549432 ~ 44552133 (+)
AMCG00004353 NA coding upstream 62005 44511847 ~ 44512326 (+)
AMCG00004354 NA coding upstream 75424 44498428 ~ 44498907 (+)
AMCG00004351 NA coding upstream 163280 44410599 ~ 44411051 (+)
AMCG00004346 NA coding upstream 775856 43795221 ~ 43798475 (+)
AMCG00004367 LOC107691633,LOC105921217,LOC103395053 coding downstream 133016 44708013 ~ 44711574 (+)
AMCG00004368 NA coding downstream 139028 44714025 ~ 44732599 (+)
AMCG00004374 NA coding downstream 493918 45068915 ~ 45096943 (+)
AMCG00004375 NA coding downstream 550927 45125924 ~ 45143449 (+)
AMCG00004378 NA coding downstream 727568 45302565 ~ 45307246 (+)
G7614 NA non-coding upstream 31188 44530340 ~ 44543143 (+)
G7584 NA non-coding upstream 237650 44336451 ~ 44336681 (+)
G7569 pvrl1b,nectin1,LOC107563312,LOC107758086,LOC107691861,LOC107670612,LOC107561861 non-coding upstream 486294 44078345 ~ 44088037 (+)
G7485 NA non-coding upstream 979253 43591750 ~ 43595078 (+)
G7441 NA non-coding upstream 1227372 43346350 ~ 43346959 (+)
G7644 NA non-coding downstream 12709 44587706 ~ 44587984 (+)
G7662 vps11,LOC107588528,LOC107578557,LOC107691631 non-coding downstream 41319 44616316 ~ 44617399 (+)
G7765 NA non-coding downstream 1344393 45919390 ~ 45921805 (+)
G7879 NA non-coding downstream 1815391 46390388 ~ 46390751 (+)
G7906 NA non-coding downstream 2140781 46715778 ~ 46717255 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 1883222 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 2357969 42210430 ~ 42216362 (+)
G7094 NA other upstream 3067100 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 4233096 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 6726611 37832623 ~ 37847720 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 43188 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 1387013 45962010 ~ 45968306 (+)
G7999 NA other downstream 3571891 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 4322120 48897117 ~ 49026355 (+)
G8099 NA other downstream 4357453 48932450 ~ 48934095 (+)

Expression


Co-expression Network