G7744


Basic Information

Item Value
gene id G7744
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 45817998 ~ 45852813 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9534
tttcagtattttaaatatctttattgtggataaatactttaaattgtgaaaaaataaaaagacataccAATTTAGGAAAACAGTTTTACATAAATTCAAGGTAACAAGAAATTATTAGTAATACCACAAGCTACAgattcttcatttttaaatgacaagcaCAACAGTTAAACAATCACAGATCTGTGGACATCATTATATGTCAAGAGAAAGGAAGCTGGTCACAGACAAATATACACACTAGCAATCacattcaagaaaaaacaagttcaaaattacaacaTACCCACATAGGTGTTTTATTCCAAGACACTCCATAAGCAACATCAAtgctgagattttttttcacttaaccTTATCCaactaaaaactattttaagactgctgtctgtttttcacaaaatgttgTCTTTACCAAATAGTACAGTACCACATTTATTTGTGGATAAGCTCATCAGTCCTTTTGGCCCAAACTTAAAGCATCTATGCAAGTATTATTGTGTGCTTTAATAATGTTCCAAATTAATCTGGGGTGTCAGTAGCATTCAGTAAAAAGGAGCTGCTGATAACAGAGCTGtagacttattttatttatcttttttttttttttcttttttttttttttttttttttt

Function

GO:

id name namespace
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9534 True 634 lncRNA 0.54 2 45817998 45852813

Neighbor

gene id symbol gene type direction distance location
AMCG00004377 NA coding downstream 544999 45269184 ~ 45272999 (-)
AMCG00004376 NA coding downstream 630585 45175332 ~ 45187413 (-)
AMCG00004373 lim2.1,LOC105900331,LOC107579014 coding downstream 1013840 44746710 ~ 44804158 (-)
AMCG00004370 NA coding downstream 1077138 44738670 ~ 44740860 (-)
AMCG00004371 LOC106567641,LOC106603659,LOC108277187 coding downstream 1125645 44684572 ~ 44692353 (-)
AMCG00004381 panx3,LOC106603665,LOC106567648,LOC107747045,LOC107686209,LOC107579026 coding upstream 8482 45861295 ~ 45867466 (-)
AMCG00004382 pknox2,LOC107686111,LOC106567647 coding upstream 21634 45874447 ~ 45890096 (-)
AMCG00004383 NA coding upstream 46456 45899269 ~ 45900449 (-)
AMCG00004385 NA coding upstream 158722 46011535 ~ 46046524 (-)
AMCG00004386 robo3,LOC106603666 coding upstream 209995 46062808 ~ 46085468 (-)
G7714 NA non-coding downstream 674546 45139142 ~ 45143452 (-)
G7704 NA non-coding downstream 938779 44797506 ~ 44879219 (-)
G7684 NA non-coding downstream 1184716 44632752 ~ 44633282 (-)
G7609 NA non-coding downstream 1297180 44520175 ~ 44520818 (-)
G7587 NA non-coding downstream 1409333 44408360 ~ 44408665 (-)
G7820 NA non-coding upstream 334693 46187506 ~ 46189689 (-)
G7866 NA non-coding upstream 451293 46304106 ~ 46304371 (-)
G7867 NA non-coding upstream 451701 46304514 ~ 46304760 (-)
G7869 NA non-coding upstream 456550 46309363 ~ 46309582 (-)
G7870 NA non-coding upstream 459624 46312437 ~ 46312684 (-)
AMCG00004372 LOC108423781,LOC105921217 other downstream 1105947 44623190 ~ 44712051 (-)
AMCG00004364 NA other downstream 1256423 44540163 ~ 44561575 (-)
G7608 NA other downstream 1295785 44520914 ~ 44522213 (-)
AMCG00004336 NA other downstream 2367743 43402953 ~ 43450255 (-)
AMCG00004313 NA other downstream 3286992 42376726 ~ 42531006 (-)
G7868 NA other upstream 454113 46306926 ~ 46307319 (-)
G7882 LOC107575789 other upstream 615312 46468125 ~ 46468434 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other upstream 1030479 46883292 ~ 46887754 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other upstream 1195311 47048124 ~ 47306589 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other upstream 2610368 48463181 ~ 48480715 (-)

Expression


Co-expression Network