G7871


Basic Information

Item Value
gene id G7871
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 46312957 ~ 46313252 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9686
CCCTATGACCCCTCTGCCGGTCTTACCTGCAGCAGGTTGGTCAGCATGATCAGGGTCTGTTTGCGGATGAGGGGCTCGGGGTCCTTCAGGCAGGCGGCAATGTTGGGGATGTACCGGTCCACCATGGTGGTGTAGCGCACACACAGGTCGCACATCACAATGATCACGTTGTTGCGCACGGGCACCTCCGTGCTCACCTCCAGCTCGCGGGCCAATGCGGGCACACACTTCTTGGCCAGGTCCTCATTCTGCAGACACAGCTTGCCTGGGACCCAGATGATCAGCAGCCGTGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9686 True 296 lncRNA 0.61 1 46312957 46313252

Neighbor

gene id symbol gene type direction distance location
AMCG00004391 v26bl,LOC108423787,LOC107751386,LOC107588734,LOC107691644,LOC105024202 coding downstream 12591 46289169 ~ 46300366 (-)
AMCG00004393 acad8 coding downstream 28094 46275576 ~ 46284863 (-)
AMCG00004394 fez1,LOC107751387,LOC107691643 coding downstream 43539 46254823 ~ 46269418 (-)
AMCG00004386 robo3,LOC106603666 coding downstream 227489 46062808 ~ 46085468 (-)
AMCG00004385 NA coding downstream 266433 46011535 ~ 46046524 (-)
AMCG00004392 NA coding upstream 6046 46319298 ~ 46336014 (-)
AMCG00004402 cadm1,LOC106603642 coding upstream 684756 46998008 ~ 47002451 (-)
AMCG00004410 NA coding upstream 2085565 48398817 ~ 48400277 (-)
AMCG00004411 NA coding upstream 2087074 48400326 ~ 48401535 (-)
AMCG00004409 NA coding upstream 2090928 48404180 ~ 48425709 (-)
G7870 NA non-coding downstream 273 46312437 ~ 46312684 (-)
G7869 NA non-coding downstream 3375 46309363 ~ 46309582 (-)
G7867 NA non-coding downstream 8197 46304514 ~ 46304760 (-)
G7866 NA non-coding downstream 8586 46304106 ~ 46304371 (-)
G7820 NA non-coding downstream 123268 46187506 ~ 46189689 (-)
G7872 NA non-coding upstream 470 46313722 ~ 46314006 (-)
G7873 NA non-coding upstream 1427 46314679 ~ 46315186 (-)
G7874 NA non-coding upstream 2105 46315357 ~ 46315669 (-)
G7875 NA non-coding upstream 2916 46316168 ~ 46316544 (-)
G7876 NA non-coding upstream 3350 46316602 ~ 46316845 (-)
G7868 NA other downstream 5638 46306926 ~ 46307319 (-)
AMCG00004372 LOC108423781,LOC105921217 other downstream 1600906 44623190 ~ 44712051 (-)
AMCG00004364 NA other downstream 1751382 44540163 ~ 44561575 (-)
G7608 NA other downstream 1790744 44520914 ~ 44522213 (-)
AMCG00004336 NA other downstream 2862702 43402953 ~ 43450255 (-)
G7882 LOC107575789 other upstream 154873 46468125 ~ 46468434 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other upstream 570040 46883292 ~ 46887754 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other upstream 734872 47048124 ~ 47306589 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other upstream 2149929 48463181 ~ 48480715 (-)
AMCG00004420 NA other upstream 2626772 48940024 ~ 48985311 (-)

Expression


Co-expression Network