G7872


Basic Information

Item Value
gene id G7872
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 46313722 ~ 46314006 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9687
GGGCTGTCTGTGGGAACTTGTTGTACTTCTCATGCTTTTCATAGCCATTGAAGTGGAAAATGCACTCTATGAAATGCTGGGAAAACATGACAGGGTTTCTCTTCAGCAGCAGGTGGACCAAACAGAATTCACAAAGCCTGAAACACGGAGCAAGGTGCACTTGTTAAAACTCATGCAAAGGGACCTcctggttaaataaaataataataataaataaataaataaataaatagaggaaACCCTTGAAATTAGGCAGCCTCTACAGCAGGTACCTGGCAATGCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9687 True 285 lncRNA 0.44 1 46313722 46314006

Neighbor

gene id symbol gene type direction distance location
AMCG00004391 v26bl,LOC108423787,LOC107751386,LOC107588734,LOC107691644,LOC105024202 coding downstream 13356 46289169 ~ 46300366 (-)
AMCG00004393 acad8 coding downstream 28859 46275576 ~ 46284863 (-)
AMCG00004394 fez1,LOC107751387,LOC107691643 coding downstream 44304 46254823 ~ 46269418 (-)
AMCG00004386 robo3,LOC106603666 coding downstream 228254 46062808 ~ 46085468 (-)
AMCG00004385 NA coding downstream 267198 46011535 ~ 46046524 (-)
AMCG00004392 NA coding upstream 5292 46319298 ~ 46336014 (-)
AMCG00004402 cadm1,LOC106603642 coding upstream 684002 46998008 ~ 47002451 (-)
AMCG00004410 NA coding upstream 2084811 48398817 ~ 48400277 (-)
AMCG00004411 NA coding upstream 2086320 48400326 ~ 48401535 (-)
AMCG00004409 NA coding upstream 2090174 48404180 ~ 48425709 (-)
G7871 NA non-coding downstream 470 46312957 ~ 46313252 (-)
G7870 NA non-coding downstream 1038 46312437 ~ 46312684 (-)
G7869 NA non-coding downstream 4140 46309363 ~ 46309582 (-)
G7867 NA non-coding downstream 8962 46304514 ~ 46304760 (-)
G7866 NA non-coding downstream 9351 46304106 ~ 46304371 (-)
G7873 NA non-coding upstream 673 46314679 ~ 46315186 (-)
G7874 NA non-coding upstream 1351 46315357 ~ 46315669 (-)
G7875 NA non-coding upstream 2162 46316168 ~ 46316544 (-)
G7876 NA non-coding upstream 2596 46316602 ~ 46316845 (-)
G7877 NA non-coding upstream 4019 46318025 ~ 46318266 (-)
G7868 NA other downstream 6403 46306926 ~ 46307319 (-)
AMCG00004372 LOC108423781,LOC105921217 other downstream 1601671 44623190 ~ 44712051 (-)
AMCG00004364 NA other downstream 1752147 44540163 ~ 44561575 (-)
G7608 NA other downstream 1791509 44520914 ~ 44522213 (-)
AMCG00004336 NA other downstream 2863467 43402953 ~ 43450255 (-)
G7882 LOC107575789 other upstream 154119 46468125 ~ 46468434 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other upstream 569286 46883292 ~ 46887754 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other upstream 734118 47048124 ~ 47306589 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other upstream 2149175 48463181 ~ 48480715 (-)
AMCG00004420 NA other upstream 2626018 48940024 ~ 48985311 (-)

Expression


Co-expression Network