G811


Basic Information

Item Value
gene id G811
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 5132700 ~ 5140245 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU969
cctTGCTCAGGTCAAGGGGGTTGAGAGACACCGCAGATCACACTCATTGACTGGGAATGATTTTGAAATTCCTGTGCTGCAGtgctgaaaacaaaagcaaagccaGCATATGAGCTGGTGGAAGCAGATTTTAGCTTTGGCTGGAAGACGCAGAGAAAAGTGAAGAACTGGGAGTTTATCAGGAATTGTCTCAATTTCTAGGAAACCCATTGTCTGATGTGGTTACACTGCGGTGCTAAGCAGCCTTCAGCCTGACAACCCCAAGCTACACAGTCAGAGATTCTAATGAATTGAATGTGCCACATAGCTTTGGATCATGAACCTGCTGTTCCTCCATCGCTTTCTCGCCATACCGTGACCGCCAATCCCAAATTTATGGACGTCGTTCCTTGGATCTCCTCTCCCTTACTTCCCtgcgtgtctctgtctctggaTCCGTTGGCACCGTGAGCCCTACTCCTGGTTCTCTCCCCGGCCATCTGGCACTGGTCCTGGATCTTTTCTCCCATCCTCAGACCTCCGCTGTCTCCCTCCGGCTTCCAATTCCTTGGCTCCCAGTGTCAGGGACTGGACTGTTGCTCACCTGTCCCAGCTGTTGGAGCGAAGACAGAGTGTGGAGCCATATACCAAGAGGGGTCCATTCCACTGGCTTTGAACGGGGGGAAAACAGCCCTGGCTTGAGTTCCCCTCGCCAGTAGGCATTAGAGGGCGCCAACTGTGATCGGACAAGGAGGAAGGCAATCAGAGCTGCCAGGGCTGCACCAGTCTCTCTGCTCAGTGCTGCTCATGTGGAATCTAGCTTTTCGTTTCCTTTATTTtgactatgtatgtatgtatgtatgtatgtatgtatttatttatttattattgatctgtttatttagtgtttgttgattttgtattactttaacattattcttataatataTTCTTTCTTACTTATTTCTGATGCCTTGGGCACTCTGTACGCAGTTCAATGTTTAGATCCTCATTAATCTGTTGTTACAACATcaataactgtatttttaaatattattctgaaattattggttaCTTCTGTTCTTAGTCTTATTCTGGgctatgcacaatattaaaaatacaatgcataccaAACATAGACATTTACCTTACATAACCTTCagattatacatatacactcacctaaaggattattaggaacaccatactaatactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU969 True 1195 lncRNA 0.36 5 5132700 5140245

Neighbor

gene id symbol gene type direction distance location
AMCG00003471 NA coding downstream 567140 4562401 ~ 4565560 (-)
AMCG00003472 NA coding downstream 579466 4547613 ~ 4553234 (-)
AMCG00003470 NA coding downstream 609702 4521548 ~ 4522998 (-)
AMCG00003466 snx17 coding downstream 728058 4376892 ~ 4404642 (-)
AMCG00003462 LOC108435005,LOC103398676,LOC105028620,LOC107697317 coding downstream 808722 4299905 ~ 4323978 (-)
AMCG00003479 NA coding upstream 50304 5190549 ~ 5225471 (-)
AMCG00003482 NA coding upstream 217341 5357586 ~ 5358050 (-)
AMCG00003483 NA coding upstream 220842 5361087 ~ 5373418 (-)
AMCG00003486 NA coding upstream 268553 5408798 ~ 5413661 (-)
AMCG00003488 kbtbd11 coding upstream 413236 5553481 ~ 5555742 (-)
G804 NA non-coding downstream 999 5131467 ~ 5131701 (-)
G786 NA non-coding downstream 150480 4982019 ~ 4982220 (-)
G777 NA non-coding downstream 349324 4779846 ~ 4783376 (-)
G762 NA non-coding downstream 585402 4545898 ~ 4547298 (-)
G748 NA non-coding downstream 611683 4520815 ~ 4521017 (-)
G844 NA non-coding upstream 189327 5329572 ~ 5329774 (-)
G845 NA non-coding upstream 190481 5330726 ~ 5334758 (-)
G862 NA non-coding upstream 200216 5340461 ~ 5341987 (-)
G942 NA non-coding upstream 611832 5752077 ~ 5755468 (-)
G946 NA non-coding upstream 647823 5788068 ~ 5788321 (-)
AMCG00003476 NA other downstream 323711 4583142 ~ 4808989 (-)
AMCG00003459 NA other downstream 1237176 3876232 ~ 3895524 (-)
AMCG00003444 NA other downstream 1593733 3536172 ~ 3538967 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other downstream 1702428 3394657 ~ 3430272 (-)
AMCG00003422 NA other downstream 2693879 2427397 ~ 2438821 (-)
AMCG00003484 NA other upstream 203825 5344070 ~ 5356468 (-)
AMCG00003550 NA other upstream 3868872 9009117 ~ 9082850 (-)
AMCG00003572 NA other upstream 4712954 9853199 ~ 9865649 (-)
AMCG00003573 NA other upstream 4734425 9874670 ~ 9878444 (-)
AMCG00003587 naa20 other upstream 5485101 10625346 ~ 10633112 (-)

Expression


Co-expression Network