G7877


Basic Information

Item Value
gene id G7877
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 46318025 ~ 46318266 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9692
CTCGGCCCCAAGGAGATGGGTTACTCACTGCCGGTCCGGGGACATCAAGTACAGGACGTTGGCATCTTTCTTCTCAGAATCTCTGGGCtctgaaaagaaatgcagacGGACATCAGCAGGATCCAGCACTAGTGCCAGCGACGCACGGATGGTTTGACAGCCTGAGACCTACCATTGTCACTGGAGTTTAACAGGGATCTGGAGATGTAACTGACTCCGGCTCCAAACGTCACATTTTCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9692 True 242 lncRNA 0.40 1 46318025 46318266

Neighbor

gene id symbol gene type direction distance location
AMCG00004391 v26bl,LOC108423787,LOC107751386,LOC107588734,LOC107691644,LOC105024202 coding downstream 17659 46289169 ~ 46300366 (-)
AMCG00004393 acad8 coding downstream 33162 46275576 ~ 46284863 (-)
AMCG00004394 fez1,LOC107751387,LOC107691643 coding downstream 48607 46254823 ~ 46269418 (-)
AMCG00004386 robo3,LOC106603666 coding downstream 232557 46062808 ~ 46085468 (-)
AMCG00004385 NA coding downstream 271501 46011535 ~ 46046524 (-)
AMCG00004392 NA coding upstream 1032 46319298 ~ 46336014 (-)
AMCG00004402 cadm1,LOC106603642 coding upstream 679742 46998008 ~ 47002451 (-)
AMCG00004410 NA coding upstream 2080551 48398817 ~ 48400277 (-)
AMCG00004411 NA coding upstream 2082060 48400326 ~ 48401535 (-)
AMCG00004409 NA coding upstream 2085914 48404180 ~ 48425709 (-)
G7876 NA non-coding downstream 1180 46316602 ~ 46316845 (-)
G7875 NA non-coding downstream 1481 46316168 ~ 46316544 (-)
G7874 NA non-coding downstream 2356 46315357 ~ 46315669 (-)
G7873 NA non-coding downstream 2839 46314679 ~ 46315186 (-)
G7872 NA non-coding downstream 4019 46313722 ~ 46314006 (-)
G7910 NA non-coding upstream 399057 46717323 ~ 46718779 (-)
G7912 NA non-coding upstream 400605 46718871 ~ 46723090 (-)
G7935 NA non-coding upstream 571381 46889647 ~ 46890133 (-)
G7936 sc5d non-coding upstream 572676 46890942 ~ 46893030 (-)
G7975 NA non-coding upstream 1329905 47648171 ~ 47648582 (-)
G7868 NA other downstream 10706 46306926 ~ 46307319 (-)
AMCG00004372 LOC108423781,LOC105921217 other downstream 1605974 44623190 ~ 44712051 (-)
AMCG00004364 NA other downstream 1756450 44540163 ~ 44561575 (-)
G7608 NA other downstream 1795812 44520914 ~ 44522213 (-)
AMCG00004336 NA other downstream 2867770 43402953 ~ 43450255 (-)
G7882 LOC107575789 other upstream 149859 46468125 ~ 46468434 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other upstream 565026 46883292 ~ 46887754 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other upstream 729858 47048124 ~ 47306589 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other upstream 2144915 48463181 ~ 48480715 (-)
AMCG00004420 NA other upstream 2621758 48940024 ~ 48985311 (-)

Expression


Co-expression Network