G7910


Basic Information

Item Value
gene id G7910
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 46717323 ~ 46718779 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9729
NNNtggtgggggcagggggggtTGGCGATGTGCGGTTGTAGTGTCTATATGGGGCGACCGGCCCACATAGGAATCGACTGGCCCACTGAACTAAACAATGGACTTGCCAGAATTGCCCAATGGCCAGTCTGCCTATGGTTACATATATGCAGAAACAGTTATACTACTCTAAACTCTTAGTATACTAGAATAGTACTACAATTGCTGTTGGAAACACACTCAATGGAAGGGGGTCCCTACTGTGTGGAGACTGAGAACGATACAGGGTCAACTGTGGCTACAGAGAGCGTTGACAGAAACACATCTGAGGCAATGCAACCTAACCCTGCTCTGGCAGCTGTTTGGCTATTGATTCACAGATCAGGCCAGAGCGATGCCAGGGAATCTACAGCAGAATCACCTGATCCCCAGATTATCAAACAGGACAGGTGTAGTTTAATGCCCAGGTGCTTTCTGAAGCAGCAGATTCCTGCAATGACACCacttttgtcacaaataaaatgagaaaatagtATATTTAGAGCTACTAACTGGTTATGAATATGAATTTGCAAGTTAGTCATATGAACAGCCTTTTACTAGAAAGGAATGgattatgttgtttttgcttagcagttaaaacacacacaaaaaaaacattcttcccCCAAATAAATTTCTTTTTTAAGAACTTGCTGAATTGATGCAAGTGTTTTTAAGTGTATTCAGAAATTTCTTGAGAATGTCACACGGTTACTAATGCACATAATACCTTGTCAGGCTACACAAGTCAATGCACGTTAATCTGCCATTACACAGACTGTATTTTATCCAGGACAATGCATACAATGGACACTGgggtatgtgtatgtttgtcttTTCATGAGGTGATCTGTAAGTTGAAACTAAACAACGTCTGGCCTATACAAACTGGATACGGCTGAATTAAAAGTGAAAGACTCCTCACATGGCAGCAATAAAGTGTATTAAATACATAGAAATTGCAAAGATAATCATAACCAGAGAATGAAAACCAGTAGTAATTTCTGAAAAGATAACTGGAAAAAGCAGTGTTTTCATCATGTAGATTGGTTCATGTCATCTGTGTAATATCAAAACAGGTTTCCCAATTCAACCTGAACCCTGCATCTTCTCCTCAGTCTCCACTGAAGAACAAACGTGACATGTGACACTGTCACATGTCACACTGAAGAATGACGGTgtagcatttgttttccttttcgtattttcctttattttgtacACAACCGAGATGCTTTGATACTAACAAGTCTATATGTGAATAAAATAGCCATCTTTCTTTTTGTCATTCATGATATAGTATTGCTCAAAATCAGCaatggatacaaaaataaaatgacttttatATATCTGGAAAAAATGGAGCACTctagcaacaacaaaaataacccCTTTCTGTCCCAGATGTGGATAGACAACATCCACAATGGTTGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9729 True 1457 lncRNA 0.39 1 46717323 46718779

Neighbor

gene id symbol gene type direction distance location
AMCG00004392 NA coding downstream 381309 46319298 ~ 46336014 (-)
AMCG00004391 v26bl,LOC108423787,LOC107751386,LOC107588734,LOC107691644,LOC105024202 coding downstream 416957 46289169 ~ 46300366 (-)
AMCG00004393 acad8 coding downstream 432460 46275576 ~ 46284863 (-)
AMCG00004394 fez1,LOC107751387,LOC107691643 coding downstream 447905 46254823 ~ 46269418 (-)
AMCG00004386 robo3,LOC106603666 coding downstream 631855 46062808 ~ 46085468 (-)
AMCG00004402 cadm1,LOC106603642 coding upstream 279229 46998008 ~ 47002451 (-)
AMCG00004410 NA coding upstream 1680038 48398817 ~ 48400277 (-)
AMCG00004411 NA coding upstream 1681547 48400326 ~ 48401535 (-)
AMCG00004409 NA coding upstream 1685401 48404180 ~ 48425709 (-)
AMCG00004413 NA coding upstream 1864360 48583139 ~ 48584401 (-)
G7877 NA non-coding downstream 399057 46318025 ~ 46318266 (-)
G7876 NA non-coding downstream 400478 46316602 ~ 46316845 (-)
G7875 NA non-coding downstream 400779 46316168 ~ 46316544 (-)
G7874 NA non-coding downstream 401654 46315357 ~ 46315669 (-)
G7873 NA non-coding downstream 402137 46314679 ~ 46315186 (-)
G7912 NA non-coding upstream 92 46718871 ~ 46723090 (-)
G7935 NA non-coding upstream 170868 46889647 ~ 46890133 (-)
G7936 sc5d non-coding upstream 172163 46890942 ~ 46893030 (-)
G7975 NA non-coding upstream 929392 47648171 ~ 47648582 (-)
G7978 NA non-coding upstream 966852 47685631 ~ 47685874 (-)
G7882 LOC107575789 other downstream 248889 46468125 ~ 46468434 (-)
G7868 NA other downstream 410004 46306926 ~ 46307319 (-)
AMCG00004372 LOC108423781,LOC105921217 other downstream 2005272 44623190 ~ 44712051 (-)
AMCG00004364 NA other downstream 2155748 44540163 ~ 44561575 (-)
G7608 NA other downstream 2195110 44520914 ~ 44522213 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other upstream 164513 46883292 ~ 46887754 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other upstream 329345 47048124 ~ 47306589 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other upstream 1744402 48463181 ~ 48480715 (-)
AMCG00004420 NA other upstream 2221245 48940024 ~ 48985311 (-)
AMCG00004429 NA other upstream 2692428 49411207 ~ 49425182 (-)

Expression


Co-expression Network