G7978


Basic Information

Item Value
gene id G7978
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 47685631 ~ 47685874 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9818
cctatcaaaagtggtccaaggaaggaaaagcggtgaaccggcgacagggtcatgggcggccaaggctcattgatgcacatggggagtgaaggctggcccgtgtggtccgatccaacagacgagctactgtagctcaaattgctgaaaaagttaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcc

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU9818 True 244 lncRNA 0.54 1 47685631 47685874

Neighbor

gene id symbol gene type direction distance location
AMCG00004402 cadm1,LOC106603642 coding downstream 683180 46998008 ~ 47002451 (-)
AMCG00004392 NA coding downstream 1349617 46319298 ~ 46336014 (-)
AMCG00004391 v26bl,LOC108423787,LOC107751386,LOC107588734,LOC107691644,LOC105024202 coding downstream 1385265 46289169 ~ 46300366 (-)
AMCG00004393 acad8 coding downstream 1400768 46275576 ~ 46284863 (-)
AMCG00004394 fez1,LOC107751387,LOC107691643 coding downstream 1416213 46254823 ~ 46269418 (-)
AMCG00004410 NA coding upstream 712943 48398817 ~ 48400277 (-)
AMCG00004411 NA coding upstream 714452 48400326 ~ 48401535 (-)
AMCG00004409 NA coding upstream 718306 48404180 ~ 48425709 (-)
AMCG00004413 NA coding upstream 897265 48583139 ~ 48584401 (-)
AMCG00004418 NA coding upstream 1203203 48889077 ~ 48895001 (-)
G7975 NA non-coding downstream 37049 47648171 ~ 47648582 (-)
G7936 sc5d non-coding downstream 792601 46890942 ~ 46893030 (-)
G7935 NA non-coding downstream 795498 46889647 ~ 46890133 (-)
G7912 NA non-coding downstream 962541 46718871 ~ 46723090 (-)
G7910 NA non-coding downstream 966852 46717323 ~ 46718779 (-)
G7979 NA non-coding upstream 51 47685925 ~ 47686567 (-)
G8116 NA non-coding upstream 1269502 48955376 ~ 48956463 (-)
G8118 NA non-coding upstream 1291750 48977624 ~ 49048073 (-)
G8133 NA non-coding upstream 1415834 49101708 ~ 49101912 (-)
G8281 NA non-coding upstream 2125504 49811378 ~ 49814054 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other downstream 379042 47048124 ~ 47306589 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other downstream 797877 46883292 ~ 46887754 (-)
G7882 LOC107575789 other downstream 1217197 46468125 ~ 46468434 (-)
G7868 NA other downstream 1378312 46306926 ~ 46307319 (-)
AMCG00004372 LOC108423781,LOC105921217 other downstream 2973580 44623190 ~ 44712051 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other upstream 777307 48463181 ~ 48480715 (-)
AMCG00004420 NA other upstream 1254150 48940024 ~ 48985311 (-)
AMCG00004429 NA other upstream 1725333 49411207 ~ 49425182 (-)
G8310 NA other upstream 2262987 49948861 ~ 49949592 (-)
G8340 NA other upstream 2319258 50005132 ~ 50008694 (-)

Expression


Co-expression Network