G7979


Basic Information

Item Value
gene id G7979
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 47685925 ~ 47686567 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9819
TGTGACATTagtttattattgaaaaatataaatatctatgAAAAGGTATCGTAAAAGAAATTAGAAACAccgtatacattattttactttatagcAGGGAGAAATCGCTATGTGTTATGTTGTTCCCCCAAGAACGTATTATTTGAGTTGCATGTTGTAAAGCCGGACAGGTTAGAGTGACGCACGTCTTTGTGTGGTGGATTGAGAGGAGTAGTGGCGCTGCACTGCTGTGCTCGGCATTGTACTTGTAACTGCAACTCGGCTtataagagaaataaacaaaagcgCCAGGAACAATAAATTGTGTCAAGGAGTCCTGATGAAAGCTGAACCCCAAACAACATGTCTACCTCCGAAGAGACTCGTTTCACGGTTTACAGTATTAATTCGCCTAATGATCGCTCTGAATCTGCAGACACCATAATCCAACTGCATCGccctttgctgtttgtttttaatggtggGCGTGTACGCAGTTGGCTGGGCAGCGCTGATTGGGCAGAACGGAGGTGCGCTCACTCAATTGGTTAGTAAGACTGCCACACAAAGAGGGCAGTCATGCTTTTGCTCTGGGACACTCgctgcatatttttcatatcGCATCCACATCGCAGTCTTTGCGATTAGCTAATCGCAACATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9819 True 643 lncRNA 0.58 1 47685925 47686567

Neighbor

gene id symbol gene type direction distance location
AMCG00004402 cadm1,LOC106603642 coding downstream 683474 46998008 ~ 47002451 (-)
AMCG00004392 NA coding downstream 1349911 46319298 ~ 46336014 (-)
AMCG00004391 v26bl,LOC108423787,LOC107751386,LOC107588734,LOC107691644,LOC105024202 coding downstream 1385559 46289169 ~ 46300366 (-)
AMCG00004393 acad8 coding downstream 1401062 46275576 ~ 46284863 (-)
AMCG00004394 fez1,LOC107751387,LOC107691643 coding downstream 1416507 46254823 ~ 46269418 (-)
AMCG00004410 NA coding upstream 712250 48398817 ~ 48400277 (-)
AMCG00004411 NA coding upstream 713759 48400326 ~ 48401535 (-)
AMCG00004409 NA coding upstream 717613 48404180 ~ 48425709 (-)
AMCG00004413 NA coding upstream 896572 48583139 ~ 48584401 (-)
AMCG00004418 NA coding upstream 1202510 48889077 ~ 48895001 (-)
G7978 NA non-coding downstream 51 47685631 ~ 47685874 (-)
G7975 NA non-coding downstream 37343 47648171 ~ 47648582 (-)
G7936 sc5d non-coding downstream 792895 46890942 ~ 46893030 (-)
G7935 NA non-coding downstream 795792 46889647 ~ 46890133 (-)
G7912 NA non-coding downstream 962835 46718871 ~ 46723090 (-)
G8116 NA non-coding upstream 1268809 48955376 ~ 48956463 (-)
G8118 NA non-coding upstream 1291057 48977624 ~ 49048073 (-)
G8133 NA non-coding upstream 1415141 49101708 ~ 49101912 (-)
G8281 NA non-coding upstream 2124811 49811378 ~ 49814054 (-)
G8286 NA non-coding upstream 2158015 49844582 ~ 49858455 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other downstream 379336 47048124 ~ 47306589 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other downstream 798171 46883292 ~ 46887754 (-)
G7882 LOC107575789 other downstream 1217491 46468125 ~ 46468434 (-)
G7868 NA other downstream 1378606 46306926 ~ 46307319 (-)
AMCG00004372 LOC108423781,LOC105921217 other downstream 2973874 44623190 ~ 44712051 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other upstream 776614 48463181 ~ 48480715 (-)
AMCG00004420 NA other upstream 1253457 48940024 ~ 48985311 (-)
AMCG00004429 NA other upstream 1724640 49411207 ~ 49425182 (-)
G8310 NA other upstream 2262294 49948861 ~ 49949592 (-)
G8340 NA other upstream 2318565 50005132 ~ 50008694 (-)

Expression


Co-expression Network