AMCG00004751


Basic Information

Item Value
gene id AMCG00004751
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 266974 ~ 305834 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004751
CCCTCTGACATTATTATATACATCAATCAAACTGGATTTAACCTGGGGGCACCAGAGCCCGGTTTGAACCACACAAAGGGTGTTTCTTCAGCCATTATTTTACCCAGTGGAACATTTCTCTTGCCTTATTTTTGCTTCTAGTTTTGGAGTAGTCACGAATGTGATATTTTACAGAGGGGGAAACAATGCAGAAGTTATTGCAACATAATACACTTATATTCTAGAAAATACATGCTACTGGAAGTAAATTCATACTGGCCAATACATTTCACAGCTGAAGTTTCCGTGAAACCTTGTTAAATGTGCAGCTAAAGAAAACGAATTCACCTCCTATAGATACatgtttgtgtacatatttgttCGGGTTAGAAACGTAAAAAAGTGTCTTGTATAGTTATCTGATGGAAGGCGGAAAATAATCTCGTAAAATATACGAGTGCATTGAAATGATTGCTATTCAGAATAGCTGGTCAATCAAATGTGCTTGGGTTCGACTGTGAACGGTTTTCAGGTTTGCGGCGCAGAAGTCcgcgggtctgcgctgctccgccaatgggatcgggggattctgcagatctgcgcagaacagTGCAGCGATGTTTGATCAGCTGCAACACACTTCACACCATCTGACGTTGCAATGGCACGCAGGATATTCACGAACAGTTATGGCAGCTGCGAGCGAGTGGCTAAAAGTGTTTTGATGAAATAATACATCGATACAAAGTTTGCTTTCCAAAACAGCAGACGCGAGCAGCCTGTGCAGCGCGCAGACCGACAGTGAGTGTTCgcggtgagagagagagggactccGGCTCCTCCTCTCCGCTCATCTGAGGGGGAAGAGAAACAAAGTTTGCATCCCTCGGTCGAGGCTCCGGCCGCAGCCTGTTGTTCGCAGGGAAACAGACACGGAAGATGGCGCAGCACCGCGGCTCTGCCACGTCTCGAAGCCCCGCGCCGCCCCGGACCCCTCGCCCCTCCGCgccgccgctgctgctgccgctgctgctgctgctgtccccGCTGCCCGCCGAGGCCGGCCTGTACTCCGCCAGCGACCAGGTGCTGCTGCCGGACCCCGACGGCATCGACGCGCTGCTGGGGAACTCGTCCCGGGCGCTGCTGCTGGAGTTCTACGCGTCGTGGTGCGGACACTGCGTGGGCTTTGCGCCCGTCTGGAAGCGCCTGGCCCGGGACATCACAGAGTGGAAGCCCGCTGTGGATCTCGCAGCCTTGGACTGTGCAGAGGAGATCAACAGGCCCACCTGCATCCGTTTCGGAGTTAACCGATACCCCACTATAAAGTTTTTCCATGCTTACTCAAAGCCCGGATCCAAGGGAGAGCTAGTTGAAGGTGTCTCTAGTGATGTGAAGGGGCTGCGGCAGCAAGTCATTGACCTCCTGGAGTCACACGGACACACCTGGCCCCCCGCCTGCCCGCCCCTCGAGCCAGCCAGTGAGGCCGAGATCGACAACTATTGGGAAACAACCAATGGGGGCTACCTGGCGCTCATCTTTGAGACGGCAGATTCATATGTGGGTCGAGAGGTCACGCTGGATCTGTTGCAGTACGAGAACATCGCGGTGAGGAGGGTGCTGAACACCGAGCAGGGCCTGGTCTCCAAGATGGCCGTCACAGACTTCCCTTCCTGCTACCTCTACTACGCCAACGGGACCTTCGCCAGGCTCAATGTGCACGTGGAGGCGCGCACGTTCTACTCCTACGTCCTCCAGCGACTGCCTACGGTGCGGCGGGCGGGAAAGCCACAGCAGGGCACTGTAACCCTGGTCGCCAATGCCACTAACCAGGAGTGGAGGGAGTTCAACAGGAGGCGGGTGTACATGGCAGACCTGGAGTCGGCGCTGCACTACTCCCTGCGCATGGAGGTGGCCGGACACCCCCAGATCAGCACAGATTCCCTGCAGGCCCTCAAGCGATACATCTCTGTCCTGGCCAAGTATTTCCCTGGGCGGCCCATTGTCATGAACCTGCTGCGATACCTGGATTCCTGGCTGCAGGGCATCACGGAGCcggagatctcctacagctctCTGCTGGATGTGCTGGACAACAAAATGGAGGTTCCCCGTGCTGCTCTGCCCAGTGAGGTGAAGTGGGTGGGCTGTCAGGGGTCCCAGCCACAGTTCAGGGGCTACCCCTGCTCTGTGTGGACCCTCTTCCACGTGCTCACAGTGCAGGCTACAGCCAACAGGACCGCTAAATCAGATCCCCTTGAGGTCCCCCAGGCACTGATTGGCTACGTGAAGAACTTCTTTGGCTGCAGAGAGTGCGCCAGCCACTTCGAGAACATGGCGCAGGAGAGCATGCAGCAAGTCAAGTCCCTCGCTTCGTCTGTGCTCTGGCTGTGGTCGCGGCACAACCGGGTCAACAACCGACTGGCAGGTGCCCTGAGTGAAGACCCCCAGTTTCCCAAGATCCAGTGGCCGCCGCCAGAGCAATGCCCAGGCTGCCACGATGTGAAGAGGGGTGAGCACACGTGGAAGCAGGAGCCGGTGCTGTACTTCCTCAAGGAGTATTTCTCGGCCCAGAGGATCCTCCCAGACTACCTGGAGGAAGAGGCCGTGCTGCTGGACAAGCAGGCAGCCCAGCGTGCAGCGGCGGAGGCTGGTGGGGGCGGCCGCAGGAAAGGCAGGGGCGCCCctgaggagggagaggaggaagaggaaggggagcagCAGCTGGCAGGGGAAGAGGAGGATGGGGAAGACGTGGATGaacagggggagggggaggcgACTGCGGAGGCTGCACCGGAGATGGAGGCCGGTGACGCGGGCCGGCACTGGGAGGACGTGGGCCCAGCCAGGATTCGGCGGCCCAGCATCGTGGGGCTCAGGCTGAGGGAGGAGCGGGGGAGCGAGGACATCGTGGACCTGGACTCCTTCGTCAACCAGCATTACAAGATCAAAGCCCTCCGTGCCGCCGCCGATGCCGCCCAccggagggaggaagaggaggaggaggctgagCAGGGGCCGTCGCTCCAGGGGCAGCCAGAGGAGCCGGCTGACTACGTGGCGGTGCGCAAGCGGCTGCAGAAGCGCGGCCTAGCGGGGAAGTACATGGGGCTGGAGGAGGCTGACACCGAGCCCCAGGGCAAGCGCTGGATCTTCCTGCTGAACGTGGGCTTCTCCCGGCTGGACATCAGCCTCTGCGTGCTGCTGTACCTGCTGTCCTCACTGTGCCTGATGGCAATGTACCTCTACTTCAAGATGAGGCTGCGGCTGCGGAGGGGCAAGCAGGCACTGCCCTGACCCCCCCGGCGGCCCTTCAGACAAAGCCTAAACCCTGATCCGCAGCCCCCCTGGAAACTGGtgtcagttgtttatttttttcgtaattcaaattattattattattattattattattattattattattattattattattattatttttcatcacTGTATTAAAACTACTTATTTGgataaaaataatctgtgaaTCACTACAAACCTCAGCTATATTGTCCATTTGAAATATACTGATAATTGAGTGGCAGAAGAGttaatttctttataaataGTTGTTTCCAGGTGATCGATCCCTCAGGAATTTGAAATGAGGAACACTGATAGAAATGGATCTGAAGTTCTGTAAATGGAAGTCCTGGGGGAATCTGATTATAGTTACTCCTGCTATAGGCTAACATTGAAGGCGTACCCTGTGTACACAATGTGAACCTGACCACCTTTTCAGTGGTGTGTGACCAGAGCTCagagcacactgcacacatccTTCAGCCCTGCTTCTGGTTCACACCACTCTCTCAAGATCCTTTGGCAGTGCTTAGAAACCTTTTTAGCACTCACTTTTTGGCAGATCTATACCTCTATTATATAAGAGGAAGTGGTCATAACTGATTGGAACAGTAAGATTGATTTGacttattatattttcaagGTTTCTAAATGTGAATAAAGTGCACATACAGCCTACTGGGGGAAAATGGGACCATATTTATTTAAGCACTGTTGGCCCGTGACAGCTGGGGCTTCATGTATGGAGCagtcccctcccccacccccacccaccacaGGAACCACAATCTTGAATATGATCTGACGTCGTAAACTGTGTCGTGGGGCAGGAGGAGGATTTTATTGGCATTTAAGAGATTTTCTTTTTGGGGGGTTGGGATATAAAGTGATGGGGGCAGGTAGGTGTGCATTTCTGATGTTGCCTTTGGTTACCTGGGCAAtgaaagagggggagggagggttTCAGCCTTTGGCCGGGTTTGTGGGGCTTCAGGGAAAGGGGATGGCCGTTCCAAATATCAGACCCTGGTCGTCTGTACTCCTACAAAACACGCCAATCACAGCTGAGAAGCAGTTCATCTAATAAGCAGTTACCCCCCAAAGCATTACCCTGTGACTTGATGAAACAAAGAAGTGGATCACAGAGCTGATGAACAGTTTGCATTGCTCTTGATTTTTGCTGTGAAATCTGACAGTTGTGTGGATTGGTGTTGCAATATTGCCTGTTGTAACGGTGCCCTGTGTAAGCTTGTGCTACATAATGTTCCTCTGTAtggtcatttaatttttttttctttttccctgtAATTGATTTTGAAGGCTAAGGAAATGCATTGTTTGCAAAGTTCAGAGCCAATTGAAAGAAGATCCCATTCTCTTGAAGTGAGTTATTCAATGATTCCATATTTGTTATGGATTTTCATGTGCttttaataattaagtaattaattaattaataatcagCCCAGTAAAGCATCCTTTCCTGAACTGCAATGTGAAactggtgtttttttgtgatgCTAGGTTAAGTTCAGGGTTTTCACAATGAAGCAAGGAAATGGACCTCGAAGTTCTGCATTTGCTGGACTAGATGGAGTGACTGATTGCTCCTACTAAAATTATTCAAAAGtgatcattaaaaatatattcactcTCAA

Function

GO: NA

KEGG:

id description
K10758 QSOX; thiol oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004751 True 4949 mRNA 0.52 13 266974 305834

Neighbor

gene id symbol gene type direction distance location
AMCG00004750 LOC107755297,LOC107599001,LOC107699337,LOC107550233,LOC107665078,LOC107758007 coding downstream 45797 215361 ~ 221177 (-)
AMCG00004752 NA coding upstream 5030 310864 ~ 364423 (-)
AMCG00004756 NA coding upstream 71284 377118 ~ 402042 (-)
AMCG00004755 NA coding upstream 109528 415362 ~ 422526 (-)
AMCG00004754 NA coding upstream 119438 425272 ~ 434187 (-)
AMCG00004753 NA coding upstream 132140 437974 ~ 445479 (-)
G142766 NA non-coding downstream 156482 109264 ~ 110492 (-)
G142765 osbpl9 non-coding downstream 157763 105040 ~ 109211 (-)
G142828 NA non-coding upstream 1282 307116 ~ 351627 (-)
G142890 NA non-coding upstream 398456 704290 ~ 705016 (-)
G142891 NA non-coding upstream 426650 732484 ~ 732959 (-)
G142902 NA non-coding upstream 474584 780418 ~ 782340 (-)
G142920 NA non-coding upstream 483268 789102 ~ 792949 (-)
G142773 NA other downstream 136271 127778 ~ 130703 (-)
G142770 NA other downstream 144447 119695 ~ 122527 (-)
AMCG00004763 LOC107393006 other upstream 338170 644004 ~ 646611 (-)
G143145 NA other upstream 2403720 2709554 ~ 2710004 (-)
AMCG00004790 ttc39a,LOC107743871,LOC107548186,LOC107699571 other upstream 2814395 3120229 ~ 3217229 (-)
AMCG00004819 zbtb37,LOC106613586 other upstream 3803248 4109082 ~ 4116414 (-)
G143659 NA other upstream 5430975 5736809 ~ 5783184 (-)

Expression


Co-expression Network