AMCG00004753


Basic Information

Item Value
gene id AMCG00004753
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 437974 ~ 445479 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004753
GTTTAGCGCATGTTTAGCGCATGTTTAGCGCATGCCTCGTCGCGTCTACCTCGCCGCTCTGCTCACGCACATGCGTAGGTGGTGCCGAGTCATTGCAGTTAAATAAAGCGCGGAGCAGACGGCGGctgtccgtgtgtctgtgtgtgtaaaccGGTATCGTTTAGGTTGTAGTCCGCGCATTATCCACACACATGGAAAACCACAATGCCAAAGTGCTATTTAACCACGCCGCAACTCTGAATCTCCACACCGGGAACCTGGTCAACAGAAGCCGGCTGAAGAAAAAATGCCCTTCTTCACCCAGTGAGGAGCTGCAGGACTGTATTCGAGCCACCCTGACTGAATGGTGTTCAAAACTTCCCCCTGCCTTGGACAAGGAACTTCCCAACACACTGGAGTGTACCTTTACTCAGGCCACAGATGCAATTACACCTGAAGAAAGGGAGGAACTGAAGGTTTCGGTGAAGCTTTTTCTCAGTGGATCAGACTGCACCTCTATCCGTAATGCTGTAGATATGGCATGTTCAGGCCTGGGGGTGTCCATGCTGGACTCTGTGATCATTGCCCCCCCCCTGCTGCCTGAGGGAGAGGGCCTAGCCCTGGGTCACCTGCAGCCTCTCTGGAAGGAGCTTGAAAGCCTGGTCCAGAGCCACAAGGTCACAGCCATCGGCACCTCCGATCTGGATAAAGCTCTACTGGAACAGCTGTACTTGTGGGCGCAGATAAAGCCCAGCAGTAATCAGGTGAACCTGGCCTCCTGCTGTGTGATGCCTCCAGACCTGACTGCATTTGCCAAGGAGTGTGATATCCAGCTGCTGACCCACAATGATCCCAAAGaacTGATGACTGCAAGCGGATTCCAGGAGGCTGTGCAGGACAGCATTGGGGAGCCGCTGGTCACAGAGTGGTTCCTGGAGTGGGTCCTACGCTACTCAGTCATTGTCAAAAGCAGAGGCATCATAAAATCAAAGGGCTACCTTGTTCAAGCCAGACGAAGCAATTCTCATGACCAGTGAATCCAGATGAATAACATCACCTTCCCCACAgatctttatttctttaattagcGAGGCTAATCTGGAGACCTTTGCGGAATAAAAAAGGACCACACCTAACTGACTCATATTATCCTAATTTACAGCCTTATGGCACGTTTCCACTTGTGTCTGTATGCTTTatggcagtggttttcaaataGGTCCTGGAgttccccctgccctgctgttttttgtgccAACTGAGGTCTTCATTAatgttcaattaaggattcaatt

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016874 ligase activity molecular_function

KEGG:

id description
K11205 GCLM; glutamate--cysteine ligase regulatory subunit

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004753 True 1274 mRNA 0.51 7 437974 445479

Neighbor

gene id symbol gene type direction distance location
AMCG00004754 NA coding downstream 3787 425272 ~ 434187 (-)
AMCG00004755 NA coding downstream 15448 415362 ~ 422526 (-)
AMCG00004756 NA coding downstream 35932 377118 ~ 402042 (-)
AMCG00004752 NA coding downstream 73551 310864 ~ 364423 (-)
AMCG00004751 NA coding downstream 132140 266974 ~ 305834 (-)
AMCG00004761 NA coding upstream 114646 560125 ~ 584445 (-)
AMCG00004762 NA coding upstream 218046 663525 ~ 673875 (-)
AMCG00004760 NA coding upstream 232387 677866 ~ 688451 (-)
AMCG00004765 NA coding upstream 347550 793029 ~ 799872 (-)
AMCG00004764 NA coding upstream 388412 833891 ~ 835155 (-)
G142828 NA non-coding downstream 86347 307116 ~ 351627 (-)
G142766 NA non-coding downstream 327482 109264 ~ 110492 (-)
G142765 osbpl9 non-coding downstream 328763 105040 ~ 109211 (-)
G142890 NA non-coding upstream 258811 704290 ~ 705016 (-)
G142891 NA non-coding upstream 287005 732484 ~ 732959 (-)
G142902 NA non-coding upstream 334939 780418 ~ 782340 (-)
G142920 NA non-coding upstream 343623 789102 ~ 792949 (-)
G142953 NA non-coding upstream 724534 1170013 ~ 1170516 (-)
G142773 NA other downstream 307271 127778 ~ 130703 (-)
G142770 NA other downstream 315447 119695 ~ 122527 (-)
AMCG00004763 LOC107393006 other upstream 198525 644004 ~ 646611 (-)
G143145 NA other upstream 2264075 2709554 ~ 2710004 (-)
AMCG00004790 ttc39a,LOC107743871,LOC107548186,LOC107699571 other upstream 2674750 3120229 ~ 3217229 (-)
AMCG00004819 zbtb37,LOC106613586 other upstream 3663603 4109082 ~ 4116414 (-)
G143659 NA other upstream 5291330 5736809 ~ 5783184 (-)

Expression


Co-expression Network