Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004755 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 415362 ~ 422526 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0019538 | protein metabolic process | biological_process |
| GO:0043603 | cellular amide metabolic process | biological_process |
| GO:0043604 | amide biosynthetic process | biological_process |
| GO:1901564 | organonitrogen compound metabolic process | biological_process |
| GO:1901566 | organonitrogen compound biosynthetic process | biological_process |
| GO:0009058 | biosynthetic process | biological_process |
| GO:0009059 | macromolecule biosynthetic process | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:1901576 | organic substance biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0010467 | gene expression | biological_process |
| GO:0044249 | cellular biosynthetic process | biological_process |
| GO:0044260 | cellular macromolecule metabolic process | biological_process |
| GO:0044267 | cellular protein metabolic process | biological_process |
| GO:0044271 | cellular nitrogen compound biosynthetic process | biological_process |
| GO:0006518 | peptide metabolic process | biological_process |
| GO:0043170 | macromolecule metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
| id | description |
|---|---|
| ko03010 | Ribosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004755 | True | 1609 | mRNA | 0.47 | 6 | 415362 | 422526 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004756 | NA | coding | downstream | 13320 | 377118 ~ 402042 (-) |
| AMCG00004752 | NA | coding | downstream | 50939 | 310864 ~ 364423 (-) |
| AMCG00004751 | NA | coding | downstream | 109528 | 266974 ~ 305834 (-) |
| AMCG00004750 | LOC107755297,LOC107599001,LOC107699337,LOC107550233,LOC107665078,LOC107758007 | coding | downstream | 194185 | 215361 ~ 221177 (-) |
| AMCG00004754 | NA | coding | upstream | 2746 | 425272 ~ 434187 (-) |
| AMCG00004753 | NA | coding | upstream | 15448 | 437974 ~ 445479 (-) |
| AMCG00004761 | NA | coding | upstream | 137599 | 560125 ~ 584445 (-) |
| AMCG00004762 | NA | coding | upstream | 240999 | 663525 ~ 673875 (-) |
| AMCG00004760 | NA | coding | upstream | 255340 | 677866 ~ 688451 (-) |
| G142828 | NA | non-coding | downstream | 63735 | 307116 ~ 351627 (-) |
| G142766 | NA | non-coding | downstream | 304870 | 109264 ~ 110492 (-) |
| G142765 | osbpl9 | non-coding | downstream | 306151 | 105040 ~ 109211 (-) |
| G142890 | NA | non-coding | upstream | 281764 | 704290 ~ 705016 (-) |
| G142891 | NA | non-coding | upstream | 309958 | 732484 ~ 732959 (-) |
| G142902 | NA | non-coding | upstream | 357892 | 780418 ~ 782340 (-) |
| G142920 | NA | non-coding | upstream | 366576 | 789102 ~ 792949 (-) |
| G142953 | NA | non-coding | upstream | 747487 | 1170013 ~ 1170516 (-) |
| G142773 | NA | other | downstream | 284659 | 127778 ~ 130703 (-) |
| G142770 | NA | other | downstream | 292835 | 119695 ~ 122527 (-) |
| AMCG00004763 | LOC107393006 | other | upstream | 221478 | 644004 ~ 646611 (-) |
| G143145 | NA | other | upstream | 2287028 | 2709554 ~ 2710004 (-) |
| AMCG00004790 | ttc39a,LOC107743871,LOC107548186,LOC107699571 | other | upstream | 2697703 | 3120229 ~ 3217229 (-) |
| AMCG00004819 | zbtb37,LOC106613586 | other | upstream | 3686556 | 4109082 ~ 4116414 (-) |
| G143659 | NA | other | upstream | 5314283 | 5736809 ~ 5783184 (-) |
