AMCG00004767


Basic Information

Item Value
gene id AMCG00004767
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 873876 ~ 945686 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004767
ATGGAGCCTTCCCCGGGAAATTACACAACCAGTGCTGGCCAGTGGCACGGGAAGGTCCTCCGCAGTGGTGAAGACCAGCCTGAGGAGAGAGGTTCCTCCCCGCAAGCTTCAGCAGAGGTGCTCAACAGCACAACAGTGCAAACCAAGTCGAAACTTCTGTCTCATGCGAGAGAACTAGAGGATTCAACCTGGGAAGAGGAAGTTTCAAGAGATGCTGAGATTGAAGAACCAGAGGTGGCTATTGCAAATCTTGCAGAGATGACAGTCACCACAGAGGAGCCAGAGCTGGAAGGAGGTAGGGAACACATCAGACCCAAAGAGAGAGCTGAGACCAACTCAAGGGGACCAGTAACCCCTTTGGAATCCTTAAAAGGATCAAGCAAGCAAACAGGACAGGTCATGGATCTCAGACCTGGGCAAAAGCGCCTTTTACCTCAGAACTGGACAACAGAAAGGCCTGCCTCAAGGAGAACGGATGACCAAATAGTGTCAGGTCCAATCACGGTACCTATTAAAGAGAGCAGGCAAAATGATAGCAGCCTGCCCCCTGAACCATCAGGAGACACAGAGCTGAACGTGCGTGTCGGTGTAGCAGGTTCAGAAACGAGAACCACCACAGGGGCGGAGCTGTTGCTTCCCGTCCATTTGACTGGGCAATATGAGCTAGAAGTGCTGCTTGAGAAAATAAACTCTACACTGCCACAGGACACGAGCCCACAGAATATGTCAAAGGCAGCGAGGGGACCTGAAGCATCGAGCCCTCCGCCATCCTTTACCTCAAATGTATCTTCCGCAAAAGCAAACGAAACCAGGAACCAGGGGCCCACAGTACAAACTGGAGCTCAGCAGCCAACTATAATGCCCAAAATGTCAGTAACACCCACAGAAGAGATGGatacagaggaggaggaggacaaggaggatgaggaggaggatgaggacaagGACGCAGAGGACAGGGCAGCACCCACCAAGTCAGTTGCGGTAGTTGAGGAAGCCGTTGAAAAGGCCACAGATCATGTCATTTCAGCTGACTTCTTCACCTCACCGCCCAGACCTACCCTGGAGGGCAGGAGACCAAGCCATAGCACTGGTCCCCAAGGGCCGCAAGGCTACACAGGGCCGAAGCGGCGAATGGGCCAGCCTGGAGAGCAGGACCCGATCAGACCCCTTGAGATGCCCAGCactttgcttttcaaaacatttgaggAAGACTGGCAAGCATTCAAGAGACAGAAGGGCCCCCCAGGCTTCTATGGACGCAAAGGGGATCCTGGGCCCCCAGGTCTCCAGGGCTTCAGTGGAGAAAAGGGATTCAAAGGGGAGCTGGGTGAGTGGggaTACCAGGGTGAACCTGGACATCAGGGGAAAAAAGGCAGGAAAGGGGAGAagTCAACAGATGAACCCAGGGATACACAGTATACAGCCCCAGGACAGAAGCTATGCAGGGTAATAAAGGATATAGGGGGGCAGTCGGAATCCCAGGGAATTATCGGCCCCAGCGGGATAAAGGGGGTGCCAGGTGTAAATGGACCCCCGggcAATCCCGGCAGTGAGGGCATCATGGGGCTGCCTGGAGTACGTGGGCCGCAGgGTGAGCAGGGGGACTCTGGGGAGATGGGAGAACTTGGACACTTGGGACCAAATGGCTATAAAGCACAGAAAGGGAAGAAAGGAGATCCAGGATTTAAAGGAGATCCTGGCTATGAAGGGATAATGGGAGAACCTGGCAAGTTTGGTGGAGATGGAGTGAAGGTATTCCTGGCAGCCGTGGGATGGATGGGACTCATGGCGCTCCGGGTTCTTACGGTCATCCAGGGTCTAAAGGGAATCCTGGACCCTGGGGACAAAAGGGCATCACAGGGAAGACAGGCACACCTGGGACACAAGGGCCTGTTGGGAAAAGGAGACATCGGAAGCAGAGGGGAAATTGGCCCTCGAGGAAAGACTGGCCCAAAGGGTAATATAGGACCCTGGGGAGAGATCGGCTTCCCTGGTCTTCCAGGCAACAGGGGGCAGCCAGGACCTTCAGGACCACCCGGGCTGCTGGGATACCCTgGTAAAGACGGAGAGCCAGGACCAGTAGGCCTGGAGGGGAACAAAGGAGACAAGGGTGTGCATGGGGTGCCAGGGGAGAAGGGAGTTGCTGGTCTCGATGGTGAGGAGGGACCTCCTGGATTAATGGGGCTTGAAGGCCCAGATGGGCTGAAGGGGCCACCTGGCAAAAAGGGGCATCAAGGGACGATGGGTCCAAAGGTGGCCAAAGGCATTCAGGGAGACTGGGGCCATCGAGGTCTGCTGGGACGAGGGGGTCCGCCAGGGAGAGAGGGTTACTCTGGGGTcccaggggagagagggaagcatGGACTGCCAGGGGAGAGGGTTTGTCTTAATTCCATCCATGAAGGAGTTATGAGGGAGCAGCTGGTAGGCTGGGCAGAGCTGGCCAAGTGGGTCTCAAGGGAAGCAGAGGTGATGATGGGGAGCATGGGAGGCCTGGGCTTCGTGGAAACAGAGGACCGCTGGCAGCGAAGGCTGGCACTGGAAAGAAAGGAAGTCGGGGCGTTCCCGGCAAACTGGGGCCACCAGGTCATCGAGGAAAGAGAGGCCCACCTGGACCTCCAGGGAAACAGGGCCCAAGGGCTTTGGATGGACTGCTGGGTGTTCAAGGGAACGAAGGAGATCCATAGAGTGGCAGCTGTGCGGTGTGAGAGTGCCTGTGGGGATGGGGACAGTGGTCGCACGGGGCGCCCAGGTACTCCAGGACCCCCAGGGAAGAAGGTGAGCACGCTGCCGgGAATTCCAGGCCTCAGAGGAGACAAGGGGAAGACTGGGCCTCAGCCTGCAAAGGGATTAAAAGGTGCCAAGGGGCTTCTGGGGCCAAATGGGCCGCCAGGTGTTAAAgggAATCGAGGCCTGCGCGGCTACAAGGGTCCTGTAGGCTCGAAAGGAAAGCAGGGCCTCTTTGGAAAGAAGAAAGTGGGCAGGCAGAAAGTGAACAGGCAGAGGCAGAGATCTCAGCAGGACCAGGGGGAACCAGATGTTGCACAGCTGGGGAGCCAGGCGCAGGGCACGAAGGAGGATCCGGCCACCTCCTGCTTGGAATTGAAGCTGAGTTACCCTCATTTACAAGACGGCTATTACTACATGGACCCCAATCAGGGCTGTCCCTTCGACGCCCTGTACGTCTTCTGCAACTTCACTGCGGGGGGAGTGACCTGCGTCCCTCCAGTGAGGTCACAGATCTCAGGACAGTGGGCTTCCAAAGAGAGGGACTCCAAAGCTTCAGTCCAGTGGTTTAGCCAGCTGAACAATGGCTTTAGGCTGGGCTTCGCTGGCCTCACCGTGGTCCAGCTACGGTTTCTACGCTTACACAGTAATTCCGCCTCTCAGTTCCTCACCGTGTATTGCCCGTCCACCGTTGCCAATGACGGTCTGACATCAGGTCAGGACCCTGCCCTGCACTTCCTGGGAGACAACGACAAAGAGATCAGCTACACAGACCCGGCCTACAGGGACAGAAGTCAAGAGTCAATCCAGATCAGGGTGGAGGCTCGGGGTCCCGACACAGAGCTGCTGCCAGTGAGAGACCTGGGGGTGGAGAGGATCGAGGATGAAGGGAGAGATTTCGCagccatcctgggccccctctgCTTTTTGGGCAGTGAAGGCGGTAAGAGCGCCCCTAGCGGCCGTGCGGGGCCGTGCGGGAGGCGGAGCGGCGGACAGGAAAGATCGAGCTTCTCCTCCTGCGTGCGGCTTCAGGAGACACACAGGAACCGGCGACCGGAGAGGAGCACTGCCGATACACAGAGGCTAGAGCACCGGGACCACTCGGGCAGCGCTCTGGGATTGCTTCGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004767 True 3864 mRNA 0.57 42 873876 945686

Neighbor

gene id symbol gene type direction distance location
AMCG00004766 NA coding downstream 15370 836242 ~ 858506 (-)
AMCG00004764 NA coding downstream 38721 833891 ~ 835155 (-)
AMCG00004765 NA coding downstream 74004 793029 ~ 799872 (-)
AMCG00004760 NA coding downstream 185425 677866 ~ 688451 (-)
AMCG00004762 NA coding downstream 200001 663525 ~ 673875 (-)
AMCG00004770 NA coding upstream 54850 1000536 ~ 1001328 (-)
AMCG00004769 LOC106613910 coding upstream 68658 1014344 ~ 1071694 (-)
AMCG00004772 NA coding upstream 128764 1074450 ~ 1108517 (-)
AMCG00004771 LOC107700326,LOC107562853,LOC107671548,LOC106613910,LOC108436878 coding upstream 196674 1142360 ~ 1150290 (-)
AMCG00004768 cacna1e,LOC107665051,LOC107549680,LOC107599003 coding upstream 231655 1177341 ~ 1177622 (-)
G142920 NA non-coding downstream 80927 789102 ~ 792949 (-)
G142902 NA non-coding downstream 91536 780418 ~ 782340 (-)
G142891 NA non-coding downstream 140917 732484 ~ 732959 (-)
G142890 NA non-coding downstream 168860 704290 ~ 705016 (-)
G142828 NA non-coding downstream 522249 307116 ~ 351627 (-)
G142953 NA non-coding upstream 224327 1170013 ~ 1170516 (-)
G142959 NA non-coding upstream 343978 1289664 ~ 1289985 (-)
G142967 NA non-coding upstream 434194 1379880 ~ 1380879 (-)
G142972 NA non-coding upstream 440737 1386423 ~ 1386687 (-)
G142990 NA non-coding upstream 581892 1527578 ~ 1527810 (-)
AMCG00004763 LOC107393006 other downstream 227265 644004 ~ 646611 (-)
G142773 NA other downstream 743173 127778 ~ 130703 (-)
G142770 NA other downstream 751349 119695 ~ 122527 (-)
G143145 NA other upstream 1763868 2709554 ~ 2710004 (-)
AMCG00004790 ttc39a,LOC107743871,LOC107548186,LOC107699571 other upstream 2174543 3120229 ~ 3217229 (-)
AMCG00004819 zbtb37,LOC106613586 other upstream 3163396 4109082 ~ 4116414 (-)
G143659 NA other upstream 4791123 5736809 ~ 5783184 (-)
G144050 selenof,LOC106598901 other upstream 7408303 8353989 ~ 8377001 (-)

Expression


Co-expression Network