AMCG00004784


Basic Information

Item Value
gene id AMCG00004784
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 2952311 ~ 2952624 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004784
AGATAGAGAAAATCCTCTGCTCAGCCAGAGAGAAACGTGAGCTTTACTACAATGGCAGAAGGGTGTTTCTCTTTCCAGATTTCAGCATGGAACTGCAAAGTAAGCGTAAAGACTTTGACCATCAAAACTTAGGGTGGAGTACAAAGGCACAAAGAGGTTTTTCCTCTCACCTCATGAGGCTGAAAACTTCCTTTAGGAAATGGCAGAGAACTGACAATATACTAGGAGAACCGAAGACCATCTTCCTGCTGTTTGCTTTCTGTAGCAGAATCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004784 True 275 mRNA 0.43 2 2952311 2952624

Neighbor

gene id symbol gene type direction distance location
AMCG00004783 elavl4,LOC107657884,LOC106613894 coding upstream 393638 2548607 ~ 2558673 (+)
AMCG00004782 elavl4,LOC106613894 coding upstream 461621 2490454 ~ 2490690 (+)
AMCG00004775 NA coding upstream 1495061 1435263 ~ 1457250 (+)
AMCG00004776 NA coding upstream 1520501 1429518 ~ 1431810 (+)
AMCG00004774 NA coding upstream 1545064 1406999 ~ 1407247 (+)
AMCG00004786 NA coding downstream 45382 2998006 ~ 3002925 (+)
AMCG00004791 calr,LOC102308154,LOC102192544,LOC101484884,LOC107393148,LOC106512241,LOC100701980 coding downstream 299346 3251970 ~ 3262480 (+)
AMCG00004792 NA coding downstream 349879 3302503 ~ 3307925 (+)
AMCG00004795 xpr1,xpr1a,LOC106584313,LOC106613915,LOC105029208 coding downstream 579860 3532484 ~ 3556450 (+)
AMCG00004798 mfsd14a,LOC106613595 coding downstream 640776 3593400 ~ 3627243 (+)
G143109 LOC103376870 non-coding upstream 190681 2720298 ~ 2761630 (+)
G143107 NA non-coding upstream 270763 2681304 ~ 2681548 (+)
G143074 NA non-coding upstream 389922 2559317 ~ 2562389 (+)
G143029 NA non-coding upstream 643437 2259729 ~ 2308874 (+)
G142973 NA non-coding upstream 1540104 1411957 ~ 1412207 (+)
G143166 NA non-coding downstream 131748 3084372 ~ 3086394 (+)
G143170 NA non-coding downstream 146498 3099122 ~ 3099384 (+)
G143192 NA non-coding downstream 282029 3234653 ~ 3236347 (+)
G143195 NA non-coding downstream 358283 3310907 ~ 3376024 (+)
G143218 NA non-coding downstream 424445 3377069 ~ 3377271 (+)
G143075 elavl4,LOC106613894,LOC103028496 other upstream 393231 2440541 ~ 2559080 (+)
AMCG00004749 NA other upstream 2829346 116491 ~ 122965 (+)
AMCG00004788 NA other downstream 170457 3123081 ~ 3160209 (+)
AMCG00004793 NA other downstream 425191 3377815 ~ 3395158 (+)
G143366 NA other downstream 996802 3949426 ~ 3949837 (+)
G143404 LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 other downstream 1156398 4109022 ~ 4109655 (+)
G143471 LOC107575789 other downstream 1419085 4371709 ~ 4372089 (+)

Expression


Co-expression Network