Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004813 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 3960595 ~ 3997246 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004813 | True | 423 | mRNA | 0.59 | 5 | 3960595 | 3997246 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004810 | slc30a7,LOC107653547,LOC107592711 | coding | upstream | 61986 | 3897939 ~ 3898609 (+) |
| AMCG00004809 | slc30a7,LOC107653547,LOC107592711 | coding | upstream | 80759 | 3864558 ~ 3879836 (+) |
| AMCG00004807 | NA | coding | upstream | 119323 | 3829041 ~ 3841272 (+) |
| AMCG00004806 | NA | coding | upstream | 168662 | 3782798 ~ 3791933 (+) |
| AMCG00004803 | NA | coding | upstream | 182198 | 3777363 ~ 3778397 (+) |
| AMCG00004815 | NA | coding | downstream | 7122 | 4004368 ~ 4021538 (+) |
| AMCG00004814 | s1pr1,LOC106613588,LOC106573949 | coding | downstream | 24561 | 4021807 ~ 4024385 (+) |
| AMCG00004818 | NA | coding | downstream | 56403 | 4053649 ~ 4079589 (+) |
| AMCG00004817 | NA | coding | downstream | 93366 | 4090612 ~ 4100452 (+) |
| AMCG00004816 | NA | coding | downstream | 130980 | 4128226 ~ 4132115 (+) |
| G143356 | NA | non-coding | upstream | 53674 | 3906593 ~ 3906921 (+) |
| G143302 | NA | non-coding | upstream | 270402 | 3689158 ~ 3690193 (+) |
| G143237 | NA | non-coding | upstream | 372490 | 3581082 ~ 3588105 (+) |
| G143218 | NA | non-coding | upstream | 583324 | 3377069 ~ 3377271 (+) |
| G143195 | NA | non-coding | upstream | 584571 | 3310907 ~ 3376024 (+) |
| G143380 | NA | non-coding | downstream | 86853 | 4084099 ~ 4089273 (+) |
| G143403 | NA | non-coding | downstream | 105016 | 4102262 ~ 4103856 (+) |
| G143405 | NA | non-coding | downstream | 116015 | 4113261 ~ 4113488 (+) |
| G143414 | NA | non-coding | downstream | 136029 | 4133275 ~ 4133909 (+) |
| G143440 | NA | non-coding | downstream | 220791 | 4218037 ~ 4238860 (+) |
| G143366 | NA | other | upstream | 10758 | 3949426 ~ 3949837 (+) |
| AMCG00004793 | NA | other | upstream | 565437 | 3377815 ~ 3395158 (+) |
| AMCG00004788 | NA | other | upstream | 800386 | 3123081 ~ 3160209 (+) |
| G143075 | elavl4,LOC106613894,LOC103028496 | other | upstream | 1401515 | 2440541 ~ 2559080 (+) |
| AMCG00004749 | NA | other | upstream | 3837630 | 116491 ~ 122965 (+) |
| G143404 | LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 | other | downstream | 111776 | 4109022 ~ 4109655 (+) |
| G143471 | LOC107575789 | other | downstream | 374463 | 4371709 ~ 4372089 (+) |
| G143626 | NA | other | downstream | 1426457 | 5423703 ~ 5424121 (+) |
| AMCG00004864 | NA | other | downstream | 3611655 | 7608901 ~ 7624070 (+) |
| AMCG00004868 | samd13 | other | downstream | 3675570 | 7672816 ~ 7692361 (+) |
