AMCG00004815


Basic Information

Item Value
gene id AMCG00004815
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 4004368 ~ 4021538 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004815
ATGTTTTACCACCAAGAGGCGGAGGTGGAATATCACCCTTTTCAGAGGCCTCAGGAGCTGCTGGAGTACTGCAGACAGGAGGGAATCGTGTTCGAGGGATTCTGCCCCCTTGCTAAAGGGCAGGCGCTCACCCACCCTACCATCGTCCAACTGGCAAACAAGTATGGTCAGACGCCCTCACAGATCTGCATCTGCTGGAGCATTCAGAATGGAGTTGTCACTATTCCCAAGTCAACCAAAGAGGACAGGATCTTGGAAAACTGTCAAACTAAGGAACACACGGCACATTTCATTCGAAACATCTGTGGATCTGACAGCCGGATATCCCCATGCGTCGGCACGggAATAGCCTACATCTGA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004815 True 360 mRNA 0.52 6 4004368 4021538

Neighbor

gene id symbol gene type direction distance location
AMCG00004813 NA coding upstream 7122 3960595 ~ 3997246 (+)
AMCG00004810 slc30a7,LOC107653547,LOC107592711 coding upstream 105759 3897939 ~ 3898609 (+)
AMCG00004809 slc30a7,LOC107653547,LOC107592711 coding upstream 124532 3864558 ~ 3879836 (+)
AMCG00004807 NA coding upstream 163096 3829041 ~ 3841272 (+)
AMCG00004806 NA coding upstream 212435 3782798 ~ 3791933 (+)
AMCG00004814 s1pr1,LOC106613588,LOC106573949 coding downstream 269 4021807 ~ 4024385 (+)
AMCG00004818 NA coding downstream 32111 4053649 ~ 4079589 (+)
AMCG00004817 NA coding downstream 69074 4090612 ~ 4100452 (+)
AMCG00004816 NA coding downstream 106688 4128226 ~ 4132115 (+)
AMCG00004822 NA coding downstream 142215 4163753 ~ 4191197 (+)
G143356 NA non-coding upstream 97447 3906593 ~ 3906921 (+)
G143302 NA non-coding upstream 314175 3689158 ~ 3690193 (+)
G143237 NA non-coding upstream 416263 3581082 ~ 3588105 (+)
G143218 NA non-coding upstream 627097 3377069 ~ 3377271 (+)
G143195 NA non-coding upstream 628344 3310907 ~ 3376024 (+)
G143380 NA non-coding downstream 62561 4084099 ~ 4089273 (+)
G143403 NA non-coding downstream 80724 4102262 ~ 4103856 (+)
G143405 NA non-coding downstream 91723 4113261 ~ 4113488 (+)
G143414 NA non-coding downstream 111737 4133275 ~ 4133909 (+)
G143440 NA non-coding downstream 196499 4218037 ~ 4238860 (+)
G143366 NA other upstream 54531 3949426 ~ 3949837 (+)
AMCG00004793 NA other upstream 609210 3377815 ~ 3395158 (+)
AMCG00004788 NA other upstream 844159 3123081 ~ 3160209 (+)
G143075 elavl4,LOC106613894,LOC103028496 other upstream 1445288 2440541 ~ 2559080 (+)
AMCG00004749 NA other upstream 3881403 116491 ~ 122965 (+)
G143404 LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 other downstream 87484 4109022 ~ 4109655 (+)
G143471 LOC107575789 other downstream 350171 4371709 ~ 4372089 (+)
G143626 NA other downstream 1402165 5423703 ~ 5424121 (+)
AMCG00004864 NA other downstream 3587363 7608901 ~ 7624070 (+)
AMCG00004868 samd13 other downstream 3651278 7672816 ~ 7692361 (+)

Expression


Co-expression Network