Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004821 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 4224907 ~ 4225812 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004821 | True | 906 | mRNA | 0.62 | 1 | 4224907 | 4225812 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004822 | NA | coding | upstream | 33710 | 4163753 ~ 4191197 (+) |
| AMCG00004816 | NA | coding | upstream | 92792 | 4128226 ~ 4132115 (+) |
| AMCG00004817 | NA | coding | upstream | 124455 | 4090612 ~ 4100452 (+) |
| AMCG00004818 | NA | coding | upstream | 145318 | 4053649 ~ 4079589 (+) |
| AMCG00004814 | s1pr1,LOC106613588,LOC106573949 | coding | upstream | 200522 | 4021807 ~ 4024385 (+) |
| AMCG00004826 | NA | coding | downstream | 63997 | 4289809 ~ 4301784 (+) |
| AMCG00004825 | NA | coding | downstream | 84956 | 4310768 ~ 4318334 (+) |
| AMCG00004827 | tm2d1,LOC107669801,LOC107715116,LOC107653653,LOC107731529 | coding | downstream | 366096 | 4591908 ~ 4600321 (+) |
| AMCG00004833 | NA | coding | downstream | 777508 | 5003320 ~ 5058089 (+) |
| AMCG00004834 | atpaf1 | coding | downstream | 832653 | 5058465 ~ 5065413 (+) |
| G143414 | NA | non-coding | upstream | 90998 | 4133275 ~ 4133909 (+) |
| G143405 | NA | non-coding | upstream | 111419 | 4113261 ~ 4113488 (+) |
| G143403 | NA | non-coding | upstream | 121051 | 4102262 ~ 4103856 (+) |
| G143380 | NA | non-coding | upstream | 135634 | 4084099 ~ 4089273 (+) |
| G143356 | NA | non-coding | upstream | 317986 | 3906593 ~ 3906921 (+) |
| G143447 | NA | non-coding | downstream | 25897 | 4251709 ~ 4252089 (+) |
| G143526 | NA | non-coding | downstream | 626351 | 4852163 ~ 4858164 (+) |
| G143630 | NA | non-coding | downstream | 1235680 | 5461492 ~ 5461854 (+) |
| G143721 | NA | non-coding | downstream | 2274424 | 6500236 ~ 6500721 (+) |
| G143772 | NA | non-coding | downstream | 2409246 | 6635058 ~ 6635410 (+) |
| G143404 | LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 | other | upstream | 115252 | 4109022 ~ 4109655 (+) |
| G143366 | NA | other | upstream | 275070 | 3949426 ~ 3949837 (+) |
| AMCG00004793 | NA | other | upstream | 829749 | 3377815 ~ 3395158 (+) |
| AMCG00004788 | NA | other | upstream | 1064698 | 3123081 ~ 3160209 (+) |
| G143075 | elavl4,LOC106613894,LOC103028496 | other | upstream | 1665827 | 2440541 ~ 2559080 (+) |
| G143471 | LOC107575789 | other | downstream | 145897 | 4371709 ~ 4372089 (+) |
| G143626 | NA | other | downstream | 1197891 | 5423703 ~ 5424121 (+) |
| AMCG00004864 | NA | other | downstream | 3383089 | 7608901 ~ 7624070 (+) |
| AMCG00004868 | samd13 | other | downstream | 3447004 | 7672816 ~ 7692361 (+) |
| AMCG00004870 | rpf1,LOC107745333 | other | downstream | 3492461 | 7718273 ~ 7734059 (+) |
