AMCG00004849


Basic Information

Item Value
gene id AMCG00004849
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 5743931 ~ 5744335 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004849
ATGACCGGGGAAAAGATCCGCTCCCTGCGCAAGGATCACAAGCCCAGCAAGGACGAGGATCTACTGGAGCCCGACGAGGAAGCCGCGGCCGGGACGTTCACCTCGTCCACCACCACCCGGACCCACAGCCGGGGCAAAGCCAATAATAAGATCTTCAGCAACCACAAGCTGCTCAAAGCCCCGGCGGTgcagcagcatcagcagcagcagtcgCAGATCAATGCCAACACCACGGCGGGGCCCATTGACGACAACAACAAGAACCCCATCGTCCGCCCCGTGGAGGACTTCCCGGTCCACGAGTGCGTGTTCAGGGGGGACGTGCGCCGGCTGTCGTCGCTCATCAGGACCCAGAACATCGCGCAGAAAGATGTGCACGGTAGGCAGCGTTTTCATTGGGAGTAa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004849 True 405 mRNA 0.61 1 5743931 5744335

Neighbor

gene id symbol gene type direction distance location
AMCG00004851 srsf11,LOC103035453,LOC105898987 coding upstream 3413 5730970 ~ 5740518 (+)
AMCG00004845 NA coding upstream 17721 5724587 ~ 5726210 (+)
AMCG00004847 NA coding upstream 35980 5657744 ~ 5707951 (+)
AMCG00004846 LOC106613881,LOC107709201 coding upstream 103218 5631156 ~ 5640713 (+)
AMCG00004839 NA coding upstream 377043 5362128 ~ 5366888 (+)
AMCG00004850 ankrd13c coding downstream 36639 5780974 ~ 5796393 (+)
AMCG00004852 NA coding downstream 56078 5800413 ~ 5816834 (+)
AMCG00004856 NA coding downstream 572566 6316901 ~ 6330455 (+)
AMCG00004855 NA coding downstream 782295 6526630 ~ 6535844 (+)
AMCG00004862 adgrl2 coding downstream 1423657 7167992 ~ 7178903 (+)
G143630 NA non-coding upstream 282077 5461492 ~ 5461854 (+)
G143526 NA non-coding upstream 885767 4852163 ~ 4858164 (+)
G143447 NA non-coding upstream 1491842 4251709 ~ 4252089 (+)
G143440 NA non-coding upstream 1505071 4218037 ~ 4238860 (+)
G143414 NA non-coding upstream 1610022 4133275 ~ 4133909 (+)
G143721 NA non-coding downstream 755901 6500236 ~ 6500721 (+)
G143772 NA non-coding downstream 890723 6635058 ~ 6635410 (+)
G143923 NA non-coding downstream 2129278 7873613 ~ 7874434 (+)
G143962 NA non-coding downstream 2234311 7978646 ~ 8049310 (+)
G143970 NA non-coding downstream 2265196 8009531 ~ 8012018 (+)
G143626 NA other upstream 319810 5423703 ~ 5424121 (+)
G143471 LOC107575789 other upstream 1371842 4371709 ~ 4372089 (+)
G143404 LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 other upstream 1634276 4109022 ~ 4109655 (+)
G143366 NA other upstream 1794094 3949426 ~ 3949837 (+)
AMCG00004793 NA other upstream 2348773 3377815 ~ 3395158 (+)
AMCG00004864 NA other downstream 1864566 7608901 ~ 7624070 (+)
AMCG00004868 samd13 other downstream 1928481 7672816 ~ 7692361 (+)
AMCG00004870 rpf1,LOC107745333 other downstream 1973938 7718273 ~ 7734059 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other downstream 3955832 9700167 ~ 9750777 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other downstream 4204075 9948410 ~ 10015424 (+)

Expression


Co-expression Network