AMCG00004856


Basic Information

Item Value
gene id AMCG00004856
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 6316901 ~ 6330455 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004856
ATGCCGTCTACAGAGGATGTAGTGAAAACCTACTTTAATATGGGATTTAACTTTAAGGAAATTCTCTCTCTTTTAGCACATAGGCATCAAGTAATCATAAGCATTAGGACTTTGAAAAGATTGTGCCAAAAGTTGAATTTGTTTAGAAGGAAGAATGCATCAAATGTGGACGAGGTGGCTTCATTCGTGCAAGGTGAACTAGCGAACTTTGGCCAGATGCAAGGATATCGATGGCTACACCTGCGGGCGATACAGAGAGGATATGTTGATGAAGTTGATGAAGTGGTGAGGACATGGAATTCTCACAAAATCCGACCAATGGGCCATGGTGGTGCTGAAGACACACTCAAGCCAGTTGACATAGAGGAAGTGGCTGCGTGTAAGGAGGAATGTGTAGCTAAAAGTCAGTATCCCTGTGATGAAACTGTTTTTGAGTTATGCTGTCTTCTAATGCAGGAAAAAGGATGGGATGCTCCTAAAGATGCATTTTCCGCAGCTGagaatggaaataataaataTTGCAAGTTTGGTCGTGGCACACGCTCCAATGTGTCCACAGCGGGGCCTTTGGAGAGGGCTACCATCCCCCCTACACCCATTCCTTTCACCCTCCGGCGATGGTCAGCAGCACAGTCCGTCGTGCATGCACTCTTCCACCGCCTGCCCTCACCTTTCCCCCACTGGCGCTCCAGtgaacaatattactactactactactactactactactactactactactactactactactactactaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004856 True 762 mRNA 0.45 6 6316901 6330455

Neighbor

gene id symbol gene type direction distance location
AMCG00004852 NA coding upstream 500067 5800413 ~ 5816834 (+)
AMCG00004850 ankrd13c coding upstream 520508 5780974 ~ 5796393 (+)
AMCG00004849 NA coding upstream 572566 5743931 ~ 5744335 (+)
AMCG00004851 srsf11,LOC103035453,LOC105898987 coding upstream 576383 5730970 ~ 5740518 (+)
AMCG00004845 NA coding upstream 590691 5724587 ~ 5726210 (+)
AMCG00004855 NA coding downstream 196175 6526630 ~ 6535844 (+)
AMCG00004862 adgrl2 coding downstream 837537 7167992 ~ 7178903 (+)
AMCG00004863 adgrl2 coding downstream 859900 7190355 ~ 7219055 (+)
AMCG00004869 prkacb coding downstream 1318335 7648790 ~ 7666437 (+)
AMCG00004871 NA coding downstream 1371514 7701969 ~ 7717478 (+)
G143630 NA non-coding upstream 855047 5461492 ~ 5461854 (+)
G143526 NA non-coding upstream 1458737 4852163 ~ 4858164 (+)
G143447 NA non-coding upstream 2064812 4251709 ~ 4252089 (+)
G143440 NA non-coding upstream 2078041 4218037 ~ 4238860 (+)
G143414 NA non-coding upstream 2182992 4133275 ~ 4133909 (+)
G143721 NA non-coding downstream 169781 6500236 ~ 6500721 (+)
G143772 NA non-coding downstream 304603 6635058 ~ 6635410 (+)
G143923 NA non-coding downstream 1543158 7873613 ~ 7874434 (+)
G143962 NA non-coding downstream 1648191 7978646 ~ 8049310 (+)
G143970 NA non-coding downstream 1679076 8009531 ~ 8012018 (+)
G143626 NA other upstream 892780 5423703 ~ 5424121 (+)
G143471 LOC107575789 other upstream 1944812 4371709 ~ 4372089 (+)
G143404 LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 other upstream 2207246 4109022 ~ 4109655 (+)
G143366 NA other upstream 2367064 3949426 ~ 3949837 (+)
AMCG00004793 NA other upstream 2921743 3377815 ~ 3395158 (+)
AMCG00004864 NA other downstream 1278446 7608901 ~ 7624070 (+)
AMCG00004868 samd13 other downstream 1342361 7672816 ~ 7692361 (+)
AMCG00004870 rpf1,LOC107745333 other downstream 1387818 7718273 ~ 7734059 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other downstream 3369712 9700167 ~ 9750777 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other downstream 3617955 9948410 ~ 10015424 (+)

Expression


Co-expression Network