AMCG00004899


Basic Information

Item Value
gene id AMCG00004899
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 8353966 ~ 8360848 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004899
CACTATGCAGGTGCCATTCTGGAAGTCTGTGGATGAAAATTGGGGAGGTTCCCTCAAGTCCAAGGAGCGACAAGCCGAAGATGTTCAAGGGTCTTCAAGTCAAGTACGTGCGAGGCTCTGACCCTGTACTGAAGCTTTTGGACGAGAGCGGGGACATTGCTGAAGAACTCAGCATCTTGAAGTGGAACACAGACAGCGTGGAAGAATTCCTGAGTGAAAAATTAGACCGTATATAAACACCATAAACGCCAAAGTATAATATCCCAaccaccgcccccccccacccttttaCACGAGTCAAAAATACTGAGGGACAATGGAAGCTCAAGATAAATGGGGCTAAAATGCAGTGAATGGGTTGTTGTTCCCCTTCAGTTTTTGACTCGTGTACAATGGATTTCCTCAACACATCTTCTACAGGGGATTGTGGGAGATGAACACATCTGCTAGCCATTTAGGGAacaattcaaagaaaataactgattGTCAGGATTCCTTTctaatgacaaaataattggCCTTGATTACCCCCTAAAAGGAAGCCTGTTTGCAGTACAAGAGATGCTGTGTActgcttattatttttctgtgtgttttgtaattaccgtttttttttcttttacttattttctataattgttctgtacagttttgtaatgaGCGTGGAGACGGCAGGGAGAAGCTGCTGAGAGGAGAGTGCGGGGCTCGTGACTTGCTCCGTCGGTGGGATATCTCGGGTCGGTGCACTTTAGTGAGGGCGACACAGTAAACCAGTTCTCTGGGATGTGTGgcctgatgtgtgtgtgttttccgaACCGGGATATTGCACTGCAGTGTATTTGTGAGCTCCttggagagggaaagggagaacaAACTGAGATttcaatgaataaaataaaaaaacgattGTTACCTGGCCCTTGTCTTGGTGTGGTTTGTCTTTAACCTGAATCAATCACTCTGGCAGACCATCTTGGCGATTTCTGGATTGGCAAATTCCCTTCCTGTCCTTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004899 True 1016 mRNA 0.45 3 8353966 8360848

Neighbor

gene id symbol gene type direction distance location
AMCG00004898 NA coding downstream 64929 8276388 ~ 8289037 (-)
AMCG00004889 NA coding downstream 140871 8137946 ~ 8213095 (-)
AMCG00004890 NA coding downstream 223679 8106410 ~ 8130287 (-)
AMCG00004878 NA coding downstream 272997 8080417 ~ 8080969 (-)
AMCG00004880 ddah1 coding downstream 325177 8026728 ~ 8028789 (-)
AMCG00004900 NA coding upstream 6243 8367091 ~ 8373756 (-)
AMCG00004893 gtf2b,LOC107693714,LOC107585659 coding upstream 464022 8824870 ~ 8835400 (-)
AMCG00004901 barhl2,LOC102777546 coding upstream 711492 9072340 ~ 9076086 (-)
AMCG00004902 NA coding upstream 778313 9139161 ~ 9152447 (-)
AMCG00004911 NA coding upstream 864803 9225651 ~ 9268221 (-)
G143922 NA non-coding downstream 495254 7857350 ~ 7858712 (-)
G143860 NA non-coding downstream 627801 7722188 ~ 7726165 (-)
G143859 NA non-coding downstream 633080 7720174 ~ 7720886 (-)
G143857 NA non-coding downstream 635164 7718260 ~ 7718802 (-)
G143853 NA non-coding downstream 643391 7709879 ~ 7710575 (-)
G144072 NA non-coding upstream 166683 8527531 ~ 8528907 (-)
G144124 NA non-coding upstream 555643 8916491 ~ 8921153 (-)
G144142 NA non-coding upstream 779771 9140619 ~ 9141972 (-)
G144205 NA non-coding upstream 1056684 9417532 ~ 9418417 (-)
G144206 NA non-coding upstream 1059654 9420502 ~ 9420880 (-)
G143659 NA other downstream 2570782 5736809 ~ 5783184 (-)
AMCG00004819 zbtb37,LOC106613586 other downstream 4237552 4109082 ~ 4116414 (-)
AMCG00004790 ttc39a,LOC107743871,LOC107548186,LOC107699571 other downstream 5136737 3120229 ~ 3217229 (-)
G143145 NA other downstream 5643962 2709554 ~ 2710004 (-)
AMCG00004763 LOC107393006 other downstream 7707355 644004 ~ 646611 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other upstream 475512 8836360 ~ 8847775 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other upstream 512037 8872885 ~ 8906594 (-)
AMCG00005011 best4,LOC103396708 other upstream 3774530 12135378 ~ 12156378 (-)
AMCG00005022 NA other upstream 3983823 12344671 ~ 12348328 (-)
G145046 NA other upstream 4975361 13336209 ~ 13336746 (-)

Expression


Co-expression Network