Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004900 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 8367091 ~ 8373756 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005788 | endoplasmic reticulum lumen | cellular_component |
| GO:0008430 | selenium binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004900 | True | 324 | mRNA | 0.49 | 3 | 8367091 | 8373756 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004899 | NA | coding | downstream | 6243 | 8353966 ~ 8360848 (-) |
| AMCG00004898 | NA | coding | downstream | 78054 | 8276388 ~ 8289037 (-) |
| AMCG00004889 | NA | coding | downstream | 153996 | 8137946 ~ 8213095 (-) |
| AMCG00004890 | NA | coding | downstream | 236804 | 8106410 ~ 8130287 (-) |
| AMCG00004878 | NA | coding | downstream | 286122 | 8080417 ~ 8080969 (-) |
| AMCG00004893 | gtf2b,LOC107693714,LOC107585659 | coding | upstream | 451114 | 8824870 ~ 8835400 (-) |
| AMCG00004901 | barhl2,LOC102777546 | coding | upstream | 698584 | 9072340 ~ 9076086 (-) |
| AMCG00004902 | NA | coding | upstream | 765405 | 9139161 ~ 9152447 (-) |
| AMCG00004911 | NA | coding | upstream | 851895 | 9225651 ~ 9268221 (-) |
| AMCG00004912 | NA | coding | upstream | 907438 | 9281194 ~ 9287486 (-) |
| G143922 | NA | non-coding | downstream | 508379 | 7857350 ~ 7858712 (-) |
| G143860 | NA | non-coding | downstream | 640926 | 7722188 ~ 7726165 (-) |
| G143859 | NA | non-coding | downstream | 646205 | 7720174 ~ 7720886 (-) |
| G143857 | NA | non-coding | downstream | 648289 | 7718260 ~ 7718802 (-) |
| G143853 | NA | non-coding | downstream | 656516 | 7709879 ~ 7710575 (-) |
| G144072 | NA | non-coding | upstream | 153775 | 8527531 ~ 8528907 (-) |
| G144124 | NA | non-coding | upstream | 542735 | 8916491 ~ 8921153 (-) |
| G144142 | NA | non-coding | upstream | 766863 | 9140619 ~ 9141972 (-) |
| G144205 | NA | non-coding | upstream | 1043776 | 9417532 ~ 9418417 (-) |
| G144206 | NA | non-coding | upstream | 1046746 | 9420502 ~ 9420880 (-) |
| G143659 | NA | other | downstream | 2583907 | 5736809 ~ 5783184 (-) |
| AMCG00004819 | zbtb37,LOC106613586 | other | downstream | 4250677 | 4109082 ~ 4116414 (-) |
| AMCG00004790 | ttc39a,LOC107743871,LOC107548186,LOC107699571 | other | downstream | 5149862 | 3120229 ~ 3217229 (-) |
| G143145 | NA | other | downstream | 5657087 | 2709554 ~ 2710004 (-) |
| AMCG00004763 | LOC107393006 | other | downstream | 7720480 | 644004 ~ 646611 (-) |
| AMCG00004894 | kat3,kyat3,ccbl2,LOC100332215 | other | upstream | 462604 | 8836360 ~ 8847775 (-) |
| G144115 | LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 | other | upstream | 499129 | 8872885 ~ 8906594 (-) |
| AMCG00005011 | best4,LOC103396708 | other | upstream | 3761622 | 12135378 ~ 12156378 (-) |
| AMCG00005022 | NA | other | upstream | 3970915 | 12344671 ~ 12348328 (-) |
| G145046 | NA | other | upstream | 4962453 | 13336209 ~ 13336746 (-) |
