AMCG00004909


Basic Information

Item Value
gene id AMCG00004909
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 9201125 ~ 9211479 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004909
TTTGCAGGCGGGGGAAGAAAGCACGGAAGGACCGACACTGAAGTAAGGCGAAACAGAGCTTATATTTcggttttgcttttaaatttcaGCCTGATTATTATGACCATATCAACAATGTTTATATCAGGCGCGCTTAATAATGACCGTGTGTGGATTATCTGAAATGAAACAACTGTACAGTATAATAATGAAACTCAGTGCCGTCATGTGCTTTCTTCGGTCTGCAGACTTTTGTATGTGCTGAGATGGAAGTCGCTCCGACGCAACTGTTGCCCAAGGACGGCGGCGCTGTGGGGTCTCTGTGCGGGGCGGACAGGGCTCCTGAAAGCCGCAAAATCTCCAGTGAAGTTAAAGCAGACATCGAAGGCTTGTATGAAGCTGTGCCCCAGCTTTCTAAAATCTTCCACGTCTTGGATAAAATCGGTGAAGGTACGTTTAGCTCCGTTTACTTGGCGGAGGCTCAGCTGAAGTCTGGAGTGAAAGAGAAGTttgctttaaaacatttgatccCAACTAGCCACCCCGTGCGAATTGCTGCAGAACTGCAATGCCTAACAGTGGCTGGTGGACAAGAAAATGTCATGGGTGTGACCTACTGCCTGAGAAAAGACGACCACGTGGTCATTGTCATGCCATACCTAGAGCATGAATCATTTGTGGAAATGTTGGGTTTGCTGCATTTTGAAGAGGTGCGACTGTATATGTTTCACTTGCTCAAGGCTCTTCAGCACATCCACGGCTTTGGCATCATTCACCGTGACATCAAGCCAAGTAACTTCCTGTACAACCGGCTGCAGAAGAAGTTTGCTCTGGTGGATTTTGGTCTGGCACAGGGCACTCCTGATACCCAGATCGAGCTCCTCAGGGTTGTGAAGGCGGAGAGCCAGCAGGGAAGTTGCTCAAAACATAAACCTCAAGTCTCTTCTGGGAGTAAGACACCACACAACAGGGCACCCTCTAAAGACCCCCCTCTGCACTCCTCCACAAAACCACCTGCTAAGCGGTCCTGGGCACTTGCACAGACTAAACACGGAAAGGATGCGGCACAGCGCTCGGTGTTCGGGGAGAGGAACCTAAACAGCCTGAACTCACACCAGGGCTCCACCGTCAAGCCTATAAAAAATACCAAGACACTAAGCCTTACGTCCAGGAAAATTGCAGTGCCGAAGCGCAGGCCAGTCGCTGTGAAGAGCACGCTTGGCACTCCCAGTCCCAAACTGGCCAGCCCGTGTCCGGCCGGCCTGACCTGCAACTGCTACATGACGGATCGGGTGTGCAATGTTTGCCTTTCCAGGAAACAACAAGTGGCCCCCAGGGCTGGGACCCCTGGGTTCAGAGCTCCCGAAGTACTCATGAAGTACCCCAACCAAGGCACAGCGATTGACATGTGGTCTGCAGGAGTCATTCTGCTGTCCTTGCTGACGGGCAGATATCCTTTCTTCAAAGCAAGTGATGACTTCATCGCCTTGGCACAAATAATGACTGTCCGCGGATCCAAAGAGACCATACGGGCTGCAAAGACATTCGGCAAATCGGTGCTGTGCAGCAAAGAGCTTCCAGCCCAGGACCTGAGGACCCTGTGCGAGAGGCTGAGAGGAACGCAGTCTCGCGCCGAGAGCAGCACCACCGACTCCAGCGCGGTCCCTGCAGATCCCCGCGTCTGCCTTGATGCCGTTGCTATGGAGGCAGATATAAACACCGAGCTGCCCATCTCAGCACGCGGACGCCAAGAACACCCCGCCCTGCACGAGGAGCCGCAGCAGGGCCCGATCACGGACTCccacagcagcaacagcagagCATCGCCAGATAAGAAGGGCTGGGACCGAGTTCCAGACACAGCCTATGATCTTCTCGACAGGCTGTTAGATATGGATCCAGCGACGAGGATCACGGCGAGCAAGGCTTTGCAGCATCCTTTCTTCCAAGGCCTGTGAGCGCAGGACGTACGGGTCACGACTGCTTTCGTGATAACGAGCAAAAGTTATCAGaagtgcttatttattttattttttattccaacccctcccacttgTGCACAGAGTGCTTCAAGGCTAGGCCACAGCCTCCGATTATGAACTGGTGACACCTGTAGCCAGCCATAGAAAAATACGAAAATAAACGCTCAGCGGCTTCCCGTTCTTGGCCATCCATCTTCAGGCACGTGGCAGGAAGGGAAGTGTGGAtttccttttattgtttttatttatgccCCGTTTACACTCTTTTAATTGGACTGTGGAGTTTGATTTATGTTCTGTTTAAGTTTTATGTTGCCTTTCTTAAACTGGTTTTATTTGGTCcgatacaaatattaaaaaaataactgaaaaaagaaaa

Function

GO:

id name namespace
GO:0016301 kinase activity molecular_function

KEGG:

id description
K02214 CDC7; cell division control protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004909 True 2340 mRNA 0.51 12 9201125 9211479

Neighbor

gene id symbol gene type direction distance location
AMCG00004910 NA coding upstream 2949 9149512 ~ 9198176 (+)
AMCG00004904 NA coding upstream 283724 8907831 ~ 8917401 (+)
AMCG00004905 LOC108413222,LOC107749977,LOC107675437,LOC107698886,LOC107564626,LOC107730703 coding upstream 294529 8889969 ~ 8906596 (+)
AMCG00004903 lrrc8c,LOC106560305,LOC106584154,LOC107749978,LOC107593158 coding upstream 321389 8854259 ~ 8879736 (+)
AMCG00004906 pkn2,LOC107718113 coding upstream 378191 8792926 ~ 8822934 (+)
AMCG00004907 brd3a,brdt,LOC107686882,LOC107675431 coding downstream 114061 9325540 ~ 9343692 (+)
AMCG00004908 ephx4,LOC106584162 coding downstream 135369 9346848 ~ 9355689 (+)
AMCG00004914 NA coding downstream 148421 9359900 ~ 9397437 (+)
AMCG00004915 NA coding downstream 188317 9399796 ~ 9402207 (+)
AMCG00004913 NA coding downstream 200425 9411904 ~ 9418523 (+)
G144141 NA non-coding upstream 27976 9172905 ~ 9173149 (+)
G144139 NA non-coding upstream 30876 9169995 ~ 9170249 (+)
G144137 NA non-coding upstream 55272 9145454 ~ 9145853 (+)
G144136 NA non-coding upstream 59221 9140642 ~ 9141904 (+)
G144111 NA non-coding upstream 348679 8852245 ~ 8852446 (+)
G144195 NA non-coding downstream 232177 9443656 ~ 9443894 (+)
G144210 NA non-coding downstream 236110 9447589 ~ 9448533 (+)
G144218 NA non-coding downstream 252662 9464141 ~ 9466613 (+)
G144227 NA non-coding downstream 283017 9494496 ~ 9500978 (+)
G144237 NA non-coding downstream 342621 9554100 ~ 9557475 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 1467066 7718273 ~ 7734059 (+)
AMCG00004868 samd13 other upstream 1508764 7672816 ~ 7692361 (+)
AMCG00004864 NA other upstream 1577055 7608901 ~ 7624070 (+)
G143626 NA other upstream 3777004 5423703 ~ 5424121 (+)
G143471 LOC107575789 other upstream 4829036 4371709 ~ 4372089 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other downstream 488688 9700167 ~ 9750777 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other downstream 736931 9948410 ~ 10015424 (+)
G144677 NA other downstream 2451202 11662681 ~ 11663368 (+)
G144940 NA other downstream 3569101 12780580 ~ 12781170 (+)
AMCG00005060 LOC106599426 other downstream 4943676 14155155 ~ 14188329 (+)

Expression


Co-expression Network