AMCG00004912


Basic Information

Item Value
gene id AMCG00004912
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 9281194 ~ 9287486 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004912
ATGGCAAGCCTCCCCCGTAAGGCCGTTCCCCCTCAGCTGGGACCCATTAATGACATCACAGTGCCCCGGCACACTGGCCCATCCAGCAAAGTCTCATTTGCCTCAGTCTCCTGGCTGTCCCCAGTGCTGAAAAGAGGCAGTGGTCCACTTTTAAGTAGCCCGTGTGAGCTGCTGCCGGTGGGAGATGATCACCCCGTCCAGGCCCTGTCTAAGAGTTTCACCGTGCTGGCGGGCTGTGCCAGCCAAGGCACCAGTGCCCTGCCCCAGGAGGTCCACATCATCAACCTGAGGGGCCCCGGAGAGGAGAGACCAGGACGGAAGCACGCTGAGCGTTCCAACTCCAGCTCCCACAAGAACAGGCAGGGGATATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004912 True 372 mRNA 0.61 4 9281194 9287486

Neighbor

gene id symbol gene type direction distance location
AMCG00004911 NA coding downstream 12973 9225651 ~ 9268221 (-)
AMCG00004902 NA coding downstream 128747 9139161 ~ 9152447 (-)
AMCG00004901 barhl2,LOC102777546 coding downstream 205108 9072340 ~ 9076086 (-)
AMCG00004893 gtf2b,LOC107693714,LOC107585659 coding downstream 445794 8824870 ~ 8835400 (-)
AMCG00004900 NA coding downstream 907438 8367091 ~ 8373756 (-)
AMCG00004916 NA coding upstream 115305 9402791 ~ 9410450 (-)
AMCG00004917 NA coding upstream 144891 9432377 ~ 9457795 (-)
AMCG00004920 evi5 coding upstream 189351 9476837 ~ 9515322 (-)
AMCG00004919 NA coding upstream 265579 9553065 ~ 9558253 (-)
AMCG00004922 gadd45a,LOC106568974,LOC107678351,LOC107555372 coding upstream 469741 9757227 ~ 9760024 (-)
G144142 NA non-coding downstream 139222 9140619 ~ 9141972 (-)
G144124 NA non-coding downstream 360041 8916491 ~ 8921153 (-)
G144072 NA non-coding downstream 752287 8527531 ~ 8528907 (-)
G143922 NA non-coding downstream 1422482 7857350 ~ 7858712 (-)
G143860 NA non-coding downstream 1555029 7722188 ~ 7726165 (-)
G144205 NA non-coding upstream 130046 9417532 ~ 9418417 (-)
G144206 NA non-coding upstream 133016 9420502 ~ 9420880 (-)
G144208 NA non-coding upstream 152240 9439726 ~ 9440310 (-)
G144209 NA non-coding upstream 153814 9441300 ~ 9442501 (-)
G144241 rpl5,LOC103464060,LOC106584167,LOC101169281,LOC107732018,LOC107566486,LOC107692344,LOC107590646,LOC103368809 non-coding upstream 259717 9547203 ~ 9551306 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 374600 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 433419 8836360 ~ 8847775 (-)
G144050 selenof,LOC106598901 other downstream 904193 8353989 ~ 8377001 (-)
G143659 NA other downstream 3498010 5736809 ~ 5783184 (-)
AMCG00004819 zbtb37,LOC106613586 other downstream 5164780 4109082 ~ 4116414 (-)
AMCG00005011 best4,LOC103396708 other upstream 2847892 12135378 ~ 12156378 (-)
AMCG00005022 NA other upstream 3057185 12344671 ~ 12348328 (-)
G145046 NA other upstream 4048723 13336209 ~ 13336746 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 5676928 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 6215596 15503082 ~ 15535145 (-)

Expression


Co-expression Network