Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004915 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 9399796 ~ 9402207 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04114 | Oocyte meiosis |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004915 | True | 552 | mRNA | 0.52 | 5 | 9399796 | 9402207 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004914 | NA | coding | upstream | 2359 | 9359900 ~ 9397437 (+) |
| AMCG00004908 | ephx4,LOC106584162 | coding | upstream | 44107 | 9346848 ~ 9355689 (+) |
| AMCG00004907 | brd3a,brdt,LOC107686882,LOC107675431 | coding | upstream | 56104 | 9325540 ~ 9343692 (+) |
| AMCG00004909 | NA | coding | upstream | 188317 | 9201125 ~ 9211479 (+) |
| AMCG00004910 | NA | coding | upstream | 201620 | 9149512 ~ 9198176 (+) |
| AMCG00004913 | NA | coding | downstream | 9697 | 9411904 ~ 9418523 (+) |
| AMCG00004918 | LOC103464060,LOC101078338,LOC103368809,LOC106584167,LOC101169281 | coding | downstream | 145021 | 9547228 ~ 9553629 (+) |
| AMCG00004926 | NA | coding | downstream | 181194 | 9583401 ~ 9593194 (+) |
| AMCG00004925 | NA | coding | downstream | 191814 | 9594021 ~ 9618789 (+) |
| AMCG00004927 | NA | coding | downstream | 230630 | 9632837 ~ 9646412 (+) |
| G144141 | NA | non-coding | upstream | 226647 | 9172905 ~ 9173149 (+) |
| G144139 | NA | non-coding | upstream | 229547 | 9169995 ~ 9170249 (+) |
| G144137 | NA | non-coding | upstream | 253943 | 9145454 ~ 9145853 (+) |
| G144136 | NA | non-coding | upstream | 257892 | 9140642 ~ 9141904 (+) |
| G144111 | NA | non-coding | upstream | 547350 | 8852245 ~ 8852446 (+) |
| G144195 | NA | non-coding | downstream | 41449 | 9443656 ~ 9443894 (+) |
| G144210 | NA | non-coding | downstream | 45382 | 9447589 ~ 9448533 (+) |
| G144218 | NA | non-coding | downstream | 61934 | 9464141 ~ 9466613 (+) |
| G144227 | NA | non-coding | downstream | 92289 | 9494496 ~ 9500978 (+) |
| G144237 | NA | non-coding | downstream | 151893 | 9554100 ~ 9557475 (+) |
| AMCG00004870 | rpf1,LOC107745333 | other | upstream | 1665737 | 7718273 ~ 7734059 (+) |
| AMCG00004868 | samd13 | other | upstream | 1707435 | 7672816 ~ 7692361 (+) |
| AMCG00004864 | NA | other | upstream | 1775726 | 7608901 ~ 7624070 (+) |
| G143626 | NA | other | upstream | 3975675 | 5423703 ~ 5424121 (+) |
| G143471 | LOC107575789 | other | upstream | 5027707 | 4371709 ~ 4372089 (+) |
| AMCG00004921 | gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 | other | downstream | 297960 | 9700167 ~ 9750777 (+) |
| AMCG00004935 | pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 | other | downstream | 546203 | 9948410 ~ 10015424 (+) |
| G144677 | NA | other | downstream | 2260474 | 11662681 ~ 11663368 (+) |
| G144940 | NA | other | downstream | 3378373 | 12780580 ~ 12781170 (+) |
| AMCG00005060 | LOC106599426 | other | downstream | 4752948 | 14155155 ~ 14188329 (+) |
