AMCG00004950


Basic Information

Item Value
gene id AMCG00004950
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 10999937 ~ 11009196 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004950
atgagttttttttcaatCCAAAGCAAAAGCGCCCTTCATCCTACTAGATCAGAAGCGACCGGATGTGGTTGATGATGAGCAGAAATCCCAACAGATGTTTAATGAAGTCCGTGTTTGACGAAACTCCATGTCGGGTTTTGCGGGTTTCTCTCCCATCGGCACCCTTTATGAGGAGCGGCGCCGCTGGAAGCCGGGCAGTGCGGCCGCTCAGTTGCCGCCATGCGTACCGCGTCTCGCTGCCCCTCTGTCGGCTGGTCTGAGCCCGGCTGCGGGGCTGTGTTAGCCGGGGTGGCCTGCGGCGCCGGGGCTGTCTTTATACTGTATAAATGGAGGAGTAAATACAGAGCACGGAGGAAGGCGGAGAGGGCGAGGCTCAAAAGGGAGGCATCGTTTCGGGAGGTGGACACCGCCGTGCAGCAGTTCAAGGAAAAGCACCCTGGGACAGATTACGCCTCCATCCTGTCTTTGTCCCTGGAGGAGCTGAGCAGCCGGCTGAGAGAGAGATCACTGAGTCCCGAGACAGTGCTGCACACTTACATGGGCAAGGCCCTCGAGCTGTCGAGGACACTGAACTGTACCACTGGATTCCTACTGGAGAGCCGTGACCATCTCCCACAGGTGGAGCAATGCACAGAGGGCCTCCTCTATGGGGTTCCTGTCAGCATCAAGGATAATGTTGCGTACAAGGGCCATGACTCCTCTTGTGGGGTGCTGTCAAAACTGGAGCAGCCAGAACCTGAGGACAGTGTGGTGGTCCAAGTGCTGAAGAAACAGGGGGCTATTCCCTTTGTGAAAACCAATATTCCTCAGGGCATGATGAGCTATGATTGCAGTAACCCCATCTACGGCCGGTCGCTCAACCCGTGTAACCTGAACAAGACACCGGGGGGGTCTTCAGGAGGCGAGGGGGCCCTGATCGGTGGAGGGGGCTCAGTCCTGGGGCTCGGCACTGATATCGGGGGCAGTATTCGGATCCCAGCCTCTTTCTGTGGCATCTGCGGCCTCAAACCAACAGCTGGCCGATTCAGCACACGTGGTATTCAGTCCTGCGTCTCTGGTCAGAAATCAGTGCTCTCCTCATTGGGCCCGATGGCCAGGGATGTGGAAGGCTTGGTCCTGTGCATGAAGGCTCTTCTCTGTGACCACATGTTCAGATTGGACCCCACGGTGCCGCCCATCCCCTTCAATGAGGAGATGTACACGAGTTCCAAGCCCCTCAGGATTGGCTACTATGAGAGCGATGGGTTTCACATGCCTTCCCCAAGCATGAGCAGAGCCGTCCGGGAAACCAAGGAGCGGCTGCAGAAAGCAGGGCACACCCTCATTCCCTTCACCCCACCTCACCTTGACTATGCCATACCCGAATTGGTCCTCAGAGGGATCCTGGCTGATGGGGCGGCCACACTACTCAAAAGCGTGACTGAAGGCAGCATCGATCCTACAGTCAATGTCCAGATCATCCCCTACAAGCTGCCCCGTTTCCTCAAGAAGATCATCGCTGTCCTTCTGAAGCCCCTGTATCCTCGTGTATCCTCATCATTCAGCGCACTTTGTGGAGTCAGTTCTATACCGGATCTTTGGAAGCAGCATGTGGCAGTGCAGGATTATTGCCACAATTTCATCTCTGAGTGGAGGAAGAGGGACCTGGACGTGCTGCTGTGTCCAATGTTGGGTCCTGCTTACAACCCCAACTACTGTGGAAAACTGATGTGTACCATCAGCTGTGTCGTGCTGTTCAACCTGCTGAACTTTCCGGCAGGGGTGGTCCCTGTAACCACAGTGACCGAGAAGGATGAGGAGGAGCTCCAGGATTACAGGGGCATCCACGGTGACCCTTGGGACAAGCTCTTCATACCGGCTCTGAGTGGCGGCCAAGGCCTGCCCATCGCTGTGCAGTGCGTGGCCCTCCCCTGGCAGGATGAGCTGTGCCTGCGCTTCATGAAGGAGGTGCAGACGCTCACTGCGTACAACAGCAAAGAGTGACTGACTGCGCACCAATTGCATTTGTAACTCCTTTACATTGctacttattttttaacaatcGAATGTTTCTAGATCAGTTCATGCTTGTACGGGAGATGtgcacagcttttgtttttaaatgtctattaAAATACTCACCACACAACTAGAAAGGTGACGGTGACAATGGTGGAGTTCACGCGTGTGTGTTTTGCACCCAGACATACAGGCAGTCATCACATCATGCCAAGACTGAGCACAATATCtggtttaatgttaattttcttccacttttctttgtctgtctgtaatGTAAAGCAATATGTgcaaatggtaaaaaaaaataaacaaatttaaatgca

Function

GO: NA

KEGG:

id description
K15528 FAAH; fatty acid amide hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004950 True 2324 mRNA 0.53 16 10999937 11009196

Neighbor

gene id symbol gene type direction distance location
AMCG00004953 LOC107672656,LOC107393234 coding upstream 41154 10956236 ~ 10958783 (+)
AMCG00004952 rad54l coding upstream 49853 10943249 ~ 10950084 (+)
AMCG00004951 pif1,LOC104945614,LOC107700539 coding upstream 59293 10931893 ~ 10940644 (+)
AMCG00004940 NA coding upstream 119630 10877927 ~ 10880307 (+)
AMCG00004938 LOC106598945 coding upstream 158483 10838986 ~ 10841454 (+)
AMCG00004957 NA coding downstream 174061 11183257 ~ 11195427 (+)
AMCG00004958 NA coding downstream 192765 11201961 ~ 11214509 (+)
AMCG00004959 zfyve9 coding downstream 207996 11217192 ~ 11221581 (+)
AMCG00004967 txndc12 coding downstream 238944 11248140 ~ 11252830 (+)
AMCG00004970 NA coding downstream 300764 11309960 ~ 11314366 (+)
G144512 NA non-coding upstream 2331 10996382 ~ 10997606 (+)
G144315 glul,gs01,LOC107083392,LOC107732203,LOC106584177,LOC108438877,LOC104941255,LOC108272186,LOC108437688,LOC105011759,LOC107733907,LOC106560331 non-coding upstream 1152181 9843429 ~ 9847756 (+)
G144237 NA non-coding upstream 1442462 9554100 ~ 9557475 (+)
G144227 NA non-coding upstream 1498959 9494496 ~ 9500978 (+)
G144218 NA non-coding upstream 1533324 9464141 ~ 9466613 (+)
G144534 NA non-coding downstream 126561 11135757 ~ 11139343 (+)
G144549 NA non-coding downstream 189117 11198313 ~ 11199835 (+)
G144581 btf3l4,bt3l4,LOC107562065,LOC107655993,LOC104965512,LOC103026176 non-coding downstream 235406 11244602 ~ 11247808 (+)
G144603 nexn non-coding downstream 320081 11329277 ~ 11331419 (+)
G144658 NA non-coding downstream 496486 11505682 ~ 11505883 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other upstream 984513 9948410 ~ 10015424 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other upstream 1249160 9700167 ~ 9750777 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 3265878 7718273 ~ 7734059 (+)
AMCG00004868 samd13 other upstream 3307576 7672816 ~ 7692361 (+)
AMCG00004864 NA other upstream 3375867 7608901 ~ 7624070 (+)
G144677 NA other downstream 653485 11662681 ~ 11663368 (+)
G144940 NA other downstream 1771384 12780580 ~ 12781170 (+)
AMCG00005060 LOC106599426 other downstream 3145959 14155155 ~ 14188329 (+)
AMCG00005105 LOC102220226,LOC108442892 other downstream 4370403 15379599 ~ 15384811 (+)
G145932 NA other downstream 6756061 17765257 ~ 17771525 (+)

Expression


Co-expression Network