AMCG00004962


Basic Information

Item Value
gene id AMCG00004962
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 11196475 ~ 11201000 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004962
ATGGCGTGATATTGCGTGTTTTAAGTATGCATGTGCAATGTCTGAAGCATGCATTTATGTATAGGTACACCGACTATCTGACAACATGGCGCAGTTCGTCTTTGAGAATGACGTGCACAGCATCCTGAAGCTGGACATGCCCCTCTCTAACGCCCCGACGGCCAGGTGGCAGCGCAAGGCCAGCTCCGCATCCGGGTCCAACACCAGCGGCTCCCCGGGCAAGTCCAGCCACTCCATGAACCGGTCGGTCAGCATGTCCAAGACGCCTGGGAAGACTCCAGGCAAGAACAGCAGCAAGACCCAGAATACCCCCTCCAAGGCAGGGGGAGACCGGTTCATCCCACAGAGAAACACTAAACAGATGGATGTGGCAACCTTCCTGCTAAGTAAAGAGAATGAGCCAGTGGACCCCAATGTATCTCCAGGCAATCAGAAAGCTTGGTCTGTTAACCTCAATGGTTATGACGTAGAAGAAGCTAAGATTTTGCATTTAGGAGGAAAGGCTTTGAATGCACCAGAAGGCTATCAGAATAACCTTAAAGTACTCTATAGCCAGGGGGCCACTCCAGTGTCGACTAAGAAGACCAACAGATACATCTCCTCAGTGCCTGACAGAATCCTGGATGCTCCTGATCTTCGAAATGATTTCTATTTGAACCTAATTGACTGGAGCAGTCAGAATTATATGGCTGTAGCTTTGCACAATCATGTGTATCTTTGGCAAGCTGCCACAGGGGACATCACTCTTCTAATGAAAATGGAACGGGATGAAGACTACATCTGCTCTGTCAGTTGGATCAAAGAAGGGAACTTCCTGGCAGTAGGGACAAGTGATGCCAAAGTGCAGCTCTGGGATGTAGAGTGTCAGAAGCGGCTGAGAAGTATGGCCAGTCACTCTGCGCGAGTGGGGTCTCTGAGCTGGAATGATCACATTCTGTCAAGTGGTTCCCGGTCTGGGCAGATCCATCACCATGACGTCAGGGTGGCTGATCACCACATACACACCCTGATTGGACACACGCAGGAGGTCTGTGGGCTCAAGTGGTCCCCAGATGGAAAGTGCCTGGCCAGTGGAGGCAATGACAATGTGGTGTTTGTGTGGCCAGATGTACGGGCAGCAGCGGTCAACTCTCCACTGCACACCTTCACTCAGCACCAGGGGGCAGTGAAGGCACTAGCCTGGTGCCCATGGCAGCCCAACATCCTTGCTAGCGGCGGTGGCACAAGTGACCGACACATCCGCATCTGGAATGCAAACACCGGTTCCTGTCTGCATGCTGTAGATACACAGTCACAGGTCTCTTCACTACTTTTTGCACCAAACTACAAGGAGCTGGTATCTGGCCATGGCTATGCACATGATCACTTGGTGATTTGGAAATATCCTGCTATGGCTAAAGTCACAGAGCTTGTTGGAAACCAAGGCCGTGTTCTGAACATGTGCCTAAGCCCTGATGGCTCTACAGTGGCTGCAGTTGCAGCTGATGAAACCGTGCGACTGTGGAAGTGCTTTGAACTGGACTCTGTGAAGAAGAAAGCTGCCAAGGAGAGGACGACCAGCAGCATCATTCACCAAGGAATCCGCTGAGCTCGGCATGAACTGTGTGTGGAGGGAGGGCGAGAGCACCTTGACTTGTGTATAGTGCAGAACTGTTTTTAATgctg

Function

GO:

id name namespace
GO:0051301 cell division biological_process

KEGG:

id description
K03363 CDC20; cell division cycle 20, cofactor of APC complex

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004962 True 1665 mRNA 0.51 10 11196475 11201000

Neighbor

gene id symbol gene type direction distance location
AMCG00004949 mob3c,LOC106613547,LOC106574029,LOC108270829 coding downstream 32906 11151383 ~ 11163569 (-)
AMCG00004948 mknk1,LOC107602795 coding downstream 49277 11135735 ~ 11147198 (-)
AMCG00004947 NA coding downstream 91360 11104564 ~ 11105115 (-)
AMCG00004955 dmbx1,dmbx1a,LOC107588924,LOC107743378,LOC107700538,LOC107684938 coding downstream 169998 11023618 ~ 11026477 (-)
AMCG00004956 NA coding downstream 201831 10992685 ~ 10994644 (-)
AMCG00004961 LOC107553256,LOC107677579,LOC107732202 coding upstream 16636 11217636 ~ 11243426 (-)
AMCG00004963 bt3l4,btf3l4,LOC107655993,LOC105028135,LOC103026176,LOC107562065 coding upstream 43611 11244611 ~ 11247754 (-)
AMCG00004960 NA coding upstream 53762 11254762 ~ 11262831 (-)
AMCG00004971 gipc2,dnajb4,LOC108430720 coding upstream 81626 11282626 ~ 11309243 (-)
AMCG00004973 NA coding upstream 128243 11329243 ~ 11339610 (-)
G144502 NA non-coding downstream 238474 10956085 ~ 10958001 (-)
G144353 NA non-coding downstream 1257864 9937980 ~ 9938611 (-)
G144295 NA non-coding downstream 1445697 9744869 ~ 9750778 (-)
G144292 NA non-coding downstream 1496066 9699314 ~ 9700409 (-)
G144286 NA non-coding downstream 1512356 9683052 ~ 9684119 (-)
G144587 NA non-coding upstream 52615 11253615 ~ 11254574 (-)
G144612 fubp1 non-coding upstream 118126 11319126 ~ 11322006 (-)
G144614 NA non-coding upstream 121583 11322583 ~ 11328481 (-)
G144657 NA non-coding upstream 298172 11499172 ~ 11501075 (-)
G144659 NA non-coding upstream 304678 11505678 ~ 11506002 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 2289881 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 2348700 8836360 ~ 8847775 (-)
G144050 selenof,LOC106598901 other downstream 2819474 8353989 ~ 8377001 (-)
G143659 NA other downstream 5413291 5736809 ~ 5783184 (-)
AMCG00004819 zbtb37,LOC106613586 other downstream 7080061 4109082 ~ 4116414 (-)
AMCG00005011 best4,LOC103396708 other upstream 934378 12135378 ~ 12156378 (-)
AMCG00005022 NA other upstream 1143671 12344671 ~ 12348328 (-)
G145046 NA other upstream 2135209 13336209 ~ 13336746 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 3763414 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 4302082 15503082 ~ 15535145 (-)

Expression


Co-expression Network