AMCG00004976


Basic Information

Item Value
gene id AMCG00004976
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 11682833 ~ 11716049 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004976
ATGCAGCGTCACGTGCGCAGCTGCCTCTACACTGGCATCTTGGTGGTGATGGGGCCGGAGAAGTCAGGGAGGCTGAAGAGGAGAGAACTCATAGCCTCCACAGGAGCGCTGGGCAGACAAGTGAGGGCGAAGGGCGAAGTGCTCAGTGACAGGAGAAACCCTGATGCCGCCGTGGAAGGCAGGGTCCTCTGGGGGCAGATTGGTTTTATATCAGAGCAAAACATGTATACAGATTTGAAAGAAGCCTCACATGCCATCACAACAACAAAGAGCCACGCCAGATCTCTCCAGCCCTCGGTGCCATGGCAAGGAAAACTGAAATCCCCTCCTCATTTTATGACCTTCTATTTGAATATACAGCTCTTTCTGGTGTCTGTGGGGCTGGAGAAAGATGAGAATCTAAAATGGGATGCAACTGGAGATGGaagcAAAATCTCTGTGCACTACCACAGAACTGATGCCCACATGGGAACTTACTTCCTCAGTAGACCCACCAATagAAACAAGGTGTTCCTTTTGCCTGACAGCCAGCTGAGGACTTCGGGGGTGCAGATTCAGTTCTGCAATGGTAATGAGAATGAGCCCGTTACCTCTAGTAGTCATGCTAGTGGCCTTTTGAAGGGCAGTGGAGTTTATGGAGTGAATCGATACAGACGCAATAATGATGTCGGGATAGCAGAAGTGAAAGGCTGCAAACCCAGAGCAAACCCGAGGGAAAAGCCCGGTCTCTTCGGGGGCAGAAAAGACACTGAACCACACTCCCCAGGGCTGAGGCAAATGGATACAGAAAACGAGGAGAAATGGAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004976 True 810 mRNA 0.51 7 11682833 11716049

Neighbor

gene id symbol gene type direction distance location
AMCG00004966 NA coding upstream 16732 11664846 ~ 11666101 (+)
AMCG00004965 pigk coding upstream 200600 11472530 ~ 11482233 (+)
AMCG00004964 NA coding upstream 272491 11401533 ~ 11410342 (+)
AMCG00004969 LOC106596347 coding upstream 293220 11364432 ~ 11389613 (+)
AMCG00004968 fubp1 coding upstream 357170 11316701 ~ 11325663 (+)
AMCG00004975 NA coding downstream 1273 11717322 ~ 11757176 (+)
AMCG00004974 slc44a5,LOC106613541,LOC106574020 coding downstream 43872 11759921 ~ 11782145 (+)
AMCG00004993 cryz coding downstream 122897 11838946 ~ 11840697 (+)
AMCG00004991 erich3 coding downstream 125117 11841166 ~ 11850241 (+)
AMCG00004992 NA coding downstream 144366 11860415 ~ 11866438 (+)
G144683 acadm,LOC107094222,LOC102791601,LOC107094221,LOC107584839,LOC107674066 non-coding upstream 5928 11674239 ~ 11676905 (+)
G144682 NA non-coding upstream 9318 11672872 ~ 11673515 (+)
G144681 NA non-coding upstream 10348 11671555 ~ 11672485 (+)
G144680 NA non-coding upstream 11391 11669475 ~ 11671442 (+)
G144668 NA non-coding upstream 105586 11570936 ~ 11577247 (+)
G144788 LOC104960733 non-coding downstream 383315 12099364 ~ 12192733 (+)
G144804 NA non-coding downstream 478077 12194126 ~ 12194338 (+)
G144805 LOC107679324,LOC107728925 non-coding downstream 480223 12196272 ~ 12196773 (+)
G144809 zswim5,LOC106569256,LOC107728925,LOC107679324 non-coding downstream 523442 12239491 ~ 12242198 (+)
G144811 NA non-coding downstream 540239 12256288 ~ 12257869 (+)
G144677 NA other upstream 19465 11662681 ~ 11663368 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other upstream 1667409 9948410 ~ 10015424 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other upstream 1932056 9700167 ~ 9750777 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 3948774 7718273 ~ 7734059 (+)
AMCG00004868 samd13 other upstream 3990472 7672816 ~ 7692361 (+)
G144940 NA other downstream 1064531 12780580 ~ 12781170 (+)
AMCG00005060 LOC106599426 other downstream 2439106 14155155 ~ 14188329 (+)
AMCG00005105 LOC102220226,LOC108442892 other downstream 3663550 15379599 ~ 15384811 (+)
G145932 NA other downstream 6049208 17765257 ~ 17771525 (+)
AMCG00005199 wdr78 other downstream 7098980 18815029 ~ 18821642 (+)

Expression


Co-expression Network