AMCG00004990


Basic Information

Item Value
gene id AMCG00004990
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 11990650 ~ 11993097 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004990
ATGCTTTCAAGAGGCAACAAGGTCATATCCAGAACGCCGGACAAGGAGAAGAAGGACAGAGGCCATCACATTGTCAAAGAGCCCTCAGTTGTGTCGGCTCCCTCCGTGGGCTACAGGCCCTCCAGAGTGGCCCCTGCCAGGGCTGTGGACAGTGGGACCATCACCCTGAAGGGACTGCTGGCCGCACAAAGGTTCACCAAGAGCCTGAAGGAGCGGACAGCTTTAAAAATAGCCACCAAGAAAAGCAGCGGGTCCCACCTGCATAAGCCTGCCCCGGTTACTGATGAAAGGGTCCCTGACACCTCCTCCAGACCCCAAGAGAAGTTCTCCTGTGCTCAAGCCCAGCAGTTGGTGAAGGGCTTATTGTGGTCTAAGTTGGAGGGAGTCTCCTATGAGGCCAAGCTGTGCACCAGGTTGACCCAGGAGCTGAGCGAAGAGCTGAAAGGTCTAGTGAAGACAGTGTGCCCACCGCGGTACAAGATGGTGTGTGTGGTCACCCTAGGTAAGAAAGCCAGGGAGGATATCTTGGTGGCCAGCCGCTGCCTGTGGGACCCCCACGCAGACAGCTACACCTCCTTCACCTACGAGAGCACCACCCTGTTCTGTGTGGCCACCGTCTTTGCAGTGTACTGCGAGTGA

Function

GO:

id name namespace
GO:0015629 actin cytoskeleton cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004990 True 639 mRNA 0.57 4 11990650 11993097

Neighbor

gene id symbol gene type direction distance location
AMCG00004988 NA coding downstream 5786 11981168 ~ 11984864 (-)
AMCG00004980 acot11,LOC106574016,LOC105895251 coding downstream 76225 11898180 ~ 11914425 (-)
AMCG00005002 NA coding downstream 107943 11879855 ~ 11882707 (-)
AMCG00005001 tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107699804,LOC105895228,LOC107710912 coding downstream 111395 11852911 ~ 11879255 (-)
AMCG00004995 NA coding downstream 155116 11832449 ~ 11835534 (-)
AMCG00004989 NA coding upstream 8014 12001111 ~ 12003204 (-)
AMCG00004987 NA coding upstream 18256 12011353 ~ 12019759 (-)
AMCG00005010 LOC104932872 coding upstream 163483 12156580 ~ 12159972 (-)
AMCG00005009 hectd3,LOC107688506 coding upstream 170733 12163830 ~ 12172230 (-)
AMCG00005004 zswim5,LOC107602525,LOC107728925,LOC107674240,LOC107714849 coding upstream 190843 12183940 ~ 12199070 (-)
G144672 NA non-coding downstream 418240 11571190 ~ 11572410 (-)
G144659 NA non-coding downstream 484648 11505678 ~ 11506002 (-)
G144657 NA non-coding downstream 489575 11499172 ~ 11501075 (-)
G144614 NA non-coding downstream 662169 11322583 ~ 11328481 (-)
G144612 fubp1 non-coding downstream 668644 11319126 ~ 11322006 (-)
G144821 NA non-coding upstream 16821 12009918 ~ 12010371 (-)
G144826 NA non-coding upstream 30417 12023514 ~ 12029449 (-)
G144877 toe1,LOC107579611 non-coding upstream 309482 12302579 ~ 12302836 (-)
G144878 NA non-coding upstream 309868 12302965 ~ 12303263 (-)
G144879 NA non-coding upstream 310314 12303411 ~ 12303620 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 3084056 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 3142875 8836360 ~ 8847775 (-)
G144050 selenof,LOC106598901 other downstream 3613649 8353989 ~ 8377001 (-)
G143659 NA other downstream 6207466 5736809 ~ 5783184 (-)
AMCG00004819 zbtb37,LOC106613586 other downstream 7874236 4109082 ~ 4116414 (-)
AMCG00005011 best4,LOC103396708 other upstream 142281 12135378 ~ 12156378 (-)
AMCG00005022 NA other upstream 351574 12344671 ~ 12348328 (-)
G145046 NA other upstream 1343112 13336209 ~ 13336746 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 2971317 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 3509985 15503082 ~ 15535145 (-)

Expression


Co-expression Network