AMCG00004991 (erich3)


Basic Information

Item Value
gene id AMCG00004991
gene name erich3
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 11841166 ~ 11850241 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004991
GCGTGGCCGGCATGTTGCGGTGGGATATGATTGGACGGCAGGGCGTGGGAGCCCGCCTCCTCCAAAGCATCATCACATGGTCTGCCTTGGCAACGCGGGTGTCTCAGTGCGCAGTGcgcgggagagagggagcgcGGATGTGACCTGtgactttgtgtttgtgttgaggatgagttgtgtgtgtgtctgagcagagaaaacaCAACTGGAGAGACGCCCCTCCTCGGTGAATCCAAAAGAGCTGCCCGCCGAAAGCATGAGTCACCCCAGCACTGGGCCGCTTTCTGCCTACAACAGCCTCACAGATAAACACCTGACTGGATACTTTAGTAACACAAGGATAAGACGGCACCTCCAAAGGGCAGGACTGGTTACAAGAAATGGACGTATTGTTCCAGACAAAGAGTACAGACATACCCTCATCCGGAGAGATCACCAGAGGTATGTGCGGGAGTGTCTCGCACAGGCCATCTTCCACAAGGTACTGGACATGGAGCGACACCATCATATAGAAATTAAGAGGAAATTAGAGGATTTTGCACGAAAAGAACGTGTGCAGAGGATTAAgGTGGAACGCTCCAAGAGATACGATGAGGATATTGTCCCCCTGCTGTCTCCAAGGCCCCCCACAGGGCCCCGTAACGGCCACGCACGGCACTCTGCACCCGAGGGAGAGCAATCTGGGTCCTCGGACTCGCCAGGCTCATCGCGTCCCAACACCGCACCGGGAAAGATGCAGAGACCTGTCCGCCTGCAGCCCATTCACAGCACCAGCACCACGGCCTCCACCCAGAGACCCTCCCCGGGCTTCAGACACAGCAACTCCTCCGAGGACACGGAGCAGCACTGCTACTACAAGCTTGATAGAGATAGTGCAAAACATTTGACTGCAACAGACTTCTCGAGTGGAATATCCCCTTACCGTCTACCGGTCATCAATAATTATGTGATCCCAGTCCCACCgtcaacaaagaaaaaagagaggAGTTTTAAGGGACGTCCTAGTGGAACAACAAGAGGTAGAAGACTCCGACCCACAACTGCACCCAATGCAAATGGAGTCACGAAGGAGACAAAGTTCCATAAGACCTCTGTGCACAGTAACGTTTCTGTCACTATGGTGTATTTTGGGAAGACTGTCCATTTGTCTCATGATGATATCGACTTTCGAGATGAAGTGAAAGTCTTCCAGCAGCACTGTGGGGGAGAAAATCTCTGTGTTTACAGAGGGAAACTAATTGAAGGAGaaacatttcagtttgtctCCAGGCGCCATCATGGCTTCCCCTTCAGTCTTACCTTCTTCCTGAATGGGATGCAAGTGGACAGACTGAGTTCCTGTTGTGAGTTCAAACATCGCAAAGGATCCCGGCTGGGTGGAAAGCACGGACACTTCGGCTTTGCCAGCATTGATGGGGCTTCTCCTTGTTACAAGTGTATCATCaccatgggtttagacaagagGCCCACACCTCCCCCTAAAAGGATAAAGGaggacacagagaaagagggcTTCACTGGGGGGTCCCTGCAGAGAACAGAGGAGAATAAAGAGGAGGACTCTGCAGAGGTCACTAAAGAAGATGACATACCCAGTGAGGAGGAGGCTGAAGATGACAAGACTATGGAAGCAGAAACGCAAGAGGAAACGCCTGAAGAGAAGGATGAAAAACATGACTATGAGGATGACTTTGAAGTCGATGATCAGCCTGATGAACAAAAAGAGGAAACTAAGACAGAGGCCCAGGTGAATGGGAAGTCATCCTCTGCATCTGATGACGAAAAGGATTGGGATGCGGACAGAAGGGAGGATAAAGAGAAAGGCCACCCTGACACTGATGATGAACAGAAAGGCAGATATTCCGACAGCGAGTTTGAAGAGGATGAGAAACCAGAAGATAAGAAGAGATCTTCGGTTTCATCCAGAAGCGATTCGTTTTCTTCAGCCAGCAGCAAAGAAGACTCGGAGAGCGAGGAGGAAGAGGTGAAGAAACCAGGCGAAGATAAAGAAGTAATCACTTATTCCAGTTTCACGACTAGCGCTGAGCCGAGAGCTGAGTCCGAGTCAAGAGCCGAGTCTGAGTCCCCacaggagctggaggagggaGACACGGACAGCAGGAAAGAGCAGGAGGACCCTGAGGAAGCAATCGAGGCCGATGAGGTGGAGGGAGAAAAAGCACAACACACAGAGGCCAGAGCTGAGACCAAGACAGAGGACCAACTAACAGAAGACACAGAAAATCAGGGCACCGGATCTCAGGAAAACCTGGAAACCCCTGAAGAGAAGACGGAAGCAGAGGAAACTGAAAGCACCGCACAGTCAGGGACAGAAGGAGATGGCCTTGCGGAAGAGAAGGAAGACTCTGCCACTCCTGTGAAAGAGGGCATAATGGGAGCCCAAGCAGATGAACAGTGTGAAGGCCCAGGTAGCAATGGAGAGGTGGGGCGGGGTGAGTACCACCATCCTGCAGAGCGGTGCGTCCCAGTGCATGTCAGCATGTCCAAAGCTGTGTGCTGTAATACAGTTTGATCTGCGGCTTCATGCATGGTTTGGAAGACTATCCTTGTTATAACTAATTTAGGCCCATCCTTCCTAGCTTTTTAAGATTGTGAATGTTTCTGTgctttgttactttttatttgtgttgccagtattttcagttcagtctttgcctttaaacataattattttaggCTTTTGGCTTCATCAAACCAGCATAATATGGTGTAAGCAGGATTTATTGCATTTGATATGTAGTTTAAATAGACTCAAAATAAGTGTTTGGAAATGTCAGACTGAACCAAATAAGCATCAATACAATTGAATATGTGTATTGAgtaaaatgctgaaaatacTGTGCTGTATGCTGTTAACAAAgtctctgtattttgtttatgtgcTGAACTGCTTTGTtgtagtaaaaaaacaaatgttagtatctttaaaatgcatacaaaacatataCTGGTATGTATTACTGAATTGTGTGTTGCATGTTTCATGAGAATGGCTGCAGGTGATTCAGctgactgtattgtatttaagtGCACATTTTTTGGTGATGTCAGAAGATTTAAATCTTTTACATTATCTTGAAAATCAGCAGTACCCCAACAGGTGAGTTTGCACAAGGCGTAAATTGAAATCCATTGAACAATCTGGCTTCCCGGTCcttgcattttccctttttcgATGATGTTGATGTTGTGGGTTTGATTGGCATTGTgcataattgtgttttgttttcaaatgacaaaatgtaCCTGTTACCAGCAGAAGAAAAACTGATTAACAAATCTAGCAATGAAGGACAAAATGAATCTGCTTACAGATATctgaatgtatgcatttatgatTTTGTctggtaaataaaatatataataatttacattcaaTCAATGCATG

Function

symbol description
erich3 Orthologous to human ERICH3 (glutamate rich 3).

NR:

description
PREDICTED: glutamate-rich protein 3 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004991 True 3409 mRNA 0.47 12 11841166 11850241

Neighbor

gene id symbol gene type direction distance location
AMCG00004993 cryz coding upstream 469 11838946 ~ 11840697 (+)
AMCG00004974 slc44a5,LOC106613541,LOC106574020 coding upstream 59021 11759921 ~ 11782145 (+)
AMCG00004975 NA coding upstream 83990 11717322 ~ 11757176 (+)
AMCG00004976 NA coding upstream 125117 11682833 ~ 11716049 (+)
AMCG00004966 NA coding upstream 175065 11664846 ~ 11666101 (+)
AMCG00004992 NA coding downstream 10174 11860415 ~ 11866438 (+)
AMCG00004978 NA coding downstream 32842 11883083 ~ 11889871 (+)
AMCG00004979 NA coding downstream 40423 11890664 ~ 11896684 (+)
AMCG00004977 NA coding downstream 105937 11956178 ~ 11979422 (+)
AMCG00004986 NA coding downstream 135019 11985260 ~ 11999730 (+)
G144683 acadm,LOC107094222,LOC102791601,LOC107094221,LOC107584839,LOC107674066 non-coding upstream 164261 11674239 ~ 11676905 (+)
G144682 NA non-coding upstream 167651 11672872 ~ 11673515 (+)
G144681 NA non-coding upstream 168681 11671555 ~ 11672485 (+)
G144680 NA non-coding upstream 169724 11669475 ~ 11671442 (+)
G144668 NA non-coding upstream 263919 11570936 ~ 11577247 (+)
G144788 LOC104960733 non-coding downstream 249123 12099364 ~ 12192733 (+)
G144804 NA non-coding downstream 343885 12194126 ~ 12194338 (+)
G144805 LOC107679324,LOC107728925 non-coding downstream 346031 12196272 ~ 12196773 (+)
G144809 zswim5,LOC106569256,LOC107728925,LOC107679324 non-coding downstream 389250 12239491 ~ 12242198 (+)
G144811 NA non-coding downstream 406047 12256288 ~ 12257869 (+)
G144677 NA other upstream 177798 11662681 ~ 11663368 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other upstream 1825742 9948410 ~ 10015424 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other upstream 2090389 9700167 ~ 9750777 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 4107107 7718273 ~ 7734059 (+)
AMCG00004868 samd13 other upstream 4148805 7672816 ~ 7692361 (+)
G144940 NA other downstream 930339 12780580 ~ 12781170 (+)
AMCG00005060 LOC106599426 other downstream 2304914 14155155 ~ 14188329 (+)
AMCG00005105 LOC102220226,LOC108442892 other downstream 3529358 15379599 ~ 15384811 (+)
G145932 NA other downstream 5915016 17765257 ~ 17771525 (+)
AMCG00005199 wdr78 other downstream 6964788 18815029 ~ 18821642 (+)

Expression


Co-expression Network