AMCG00004993 (cryz)


Basic Information

Item Value
gene id AMCG00004993
gene name cryz
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 11838946 ~ 11840697 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004993
ATGCATTATTTAGCTcgaacacatttacacacattatGTTTCTTGTTACAGGCAGGTGATCGTGTCTTCACTACCAGCACAGAAACTGGGGGTTATGCTGAATACACAAAAGCTTCAGAGGATTCGGTTCATCTGCTGCCTGATAATTTAGACTACAAACAAGGAGCTGCTATTGGAATCCCTTACTTCACTGCCTACCGCGCTCTCTTCCATAGAGCCCATGCCAAGTCAGGAGAGAGTGTTCTTGTTCATGGAGCAAGTGGAGGGGTTGGTGTGGCAGCATGTCAGATAGCCAGAGCCTTTGGCATGAAGGTGCTGGGGACGGCCGGGACTCCTGAAGGACTCGCTTTAGTGATGAAGAACGGAGCTCATCAGGTCTTCAACCACAGAGAGAAGGACTACATTGACAAAATCAAGGAAGCTACTAGCGAAAAAGGAGTGGACGTGATCATTGAGATGCTGTCAAATGTGAATCTGAGTCATGACTTGCAGCTGGTGTCATATGGAGGGAGAGTGATTATCGTGGGCTGCAGAGGGCCCATCGAAATCAATCCAAGGGACACCATGGTCAAAGAATCCAGCATCATCGGTGTGTCACTTTTCTTGGCAACAAAGGAAGAGAAGGCTGAGTGTGCCGCAGCACTCTTCGCTGGGATGGAAGCTGGCTGGCTGAAGCCGGTGGTTGGTCCACAGCATCCCCTGGAGAAGGCCTCACAGGCCCACGAGGACATCATAAACAGCCCTGGAGCGGCAGGGAAGATGGTCTTATTAATGTGA

Function

symbol description
cryz Predicted to enable NADPH binding activity; NADPH:quinone reductase activity; and mRNA 3'-UTR binding activity. Predicted to be active in cytosol. Orthologous to human CRYZ (crystallin zeta).

NR:

description
PREDICTED: quinone oxidoreductase

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K00344 qor, CRYZ; NADPH:quinone reductase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004993 True 777 mRNA 0.50 6 11838946 11840697

Neighbor

gene id symbol gene type direction distance location
AMCG00004974 slc44a5,LOC106613541,LOC106574020 coding upstream 56801 11759921 ~ 11782145 (+)
AMCG00004975 NA coding upstream 81770 11717322 ~ 11757176 (+)
AMCG00004976 NA coding upstream 122897 11682833 ~ 11716049 (+)
AMCG00004966 NA coding upstream 172845 11664846 ~ 11666101 (+)
AMCG00004965 pigk coding upstream 356713 11472530 ~ 11482233 (+)
AMCG00004991 erich3 coding downstream 469 11841166 ~ 11850241 (+)
AMCG00004992 NA coding downstream 19718 11860415 ~ 11866438 (+)
AMCG00004978 NA coding downstream 42386 11883083 ~ 11889871 (+)
AMCG00004979 NA coding downstream 49967 11890664 ~ 11896684 (+)
AMCG00004977 NA coding downstream 115481 11956178 ~ 11979422 (+)
G144683 acadm,LOC107094222,LOC102791601,LOC107094221,LOC107584839,LOC107674066 non-coding upstream 162041 11674239 ~ 11676905 (+)
G144682 NA non-coding upstream 165431 11672872 ~ 11673515 (+)
G144681 NA non-coding upstream 166461 11671555 ~ 11672485 (+)
G144680 NA non-coding upstream 167504 11669475 ~ 11671442 (+)
G144668 NA non-coding upstream 261699 11570936 ~ 11577247 (+)
G144788 LOC104960733 non-coding downstream 258667 12099364 ~ 12192733 (+)
G144804 NA non-coding downstream 353429 12194126 ~ 12194338 (+)
G144805 LOC107679324,LOC107728925 non-coding downstream 355575 12196272 ~ 12196773 (+)
G144809 zswim5,LOC106569256,LOC107728925,LOC107679324 non-coding downstream 398794 12239491 ~ 12242198 (+)
G144811 NA non-coding downstream 415591 12256288 ~ 12257869 (+)
G144677 NA other upstream 175578 11662681 ~ 11663368 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other upstream 1823522 9948410 ~ 10015424 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other upstream 2088169 9700167 ~ 9750777 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 4104887 7718273 ~ 7734059 (+)
AMCG00004868 samd13 other upstream 4146585 7672816 ~ 7692361 (+)
G144940 NA other downstream 939883 12780580 ~ 12781170 (+)
AMCG00005060 LOC106599426 other downstream 2314458 14155155 ~ 14188329 (+)
AMCG00005105 LOC102220226,LOC108442892 other downstream 3538902 15379599 ~ 15384811 (+)
G145932 NA other downstream 5924560 17765257 ~ 17771525 (+)
AMCG00005199 wdr78 other downstream 6974332 18815029 ~ 18821642 (+)

Expression


Co-expression Network