AMCG00004997


Basic Information

Item Value
gene id AMCG00004997
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 11412899 ~ 11438182 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004997
CTTGATGCGGACAGAGATGAAGAAGAAGTTTTCTATGACATAAGTGTAACTGTTGACAACAAGTTGTTTCCCACCAAAGAACCCGTGGCAGGGCCCAGTGAACTTGACCTCAGTCTTCTTGTGGATTCTGCCGACTCTGCGGATATCTGCTCACAATTTGAAGAGCAGCCTGAAGATGATTTTTCTGCATATGGAGAAGATAATTTTGAagAGGAGATAAAGAAGTTGAAGATCGTCTTTGTGACAGGTGGGCCCGGCTCGGGGAAGGGCACGCAGTGTGAGAAGATAGCGGAGAAGTACGGCCTCACGTCACTGTCCGTGGGGGACCTCCTGCGAGGCGAGCTGCAGGCGGACTCAGAGCGGAGCTGCTTCCTCAAGGACATCGTTGAACGTGGAGAGCTGCTGCCCATGgagctgctgctggagctggtgAGGGAAGCCATGGCTGCTAGTCTGGACAGCACCAAGGGCTTCGTGATGGACGGCTTTCCACGAGATGTGAAGCAGGGAGAGGAGTTTGAAGCCAAGATTGCACCCCCCAGCCTCGTCCTGGTGATGGACTGCTCAGCCGAGACTATGTCCACGCGGCTGCAGCACCGGCCCCAGTCCAGCCCCCGCCCCGACGACGGCAGAGACGCCATCCGCCGGAGACTGGAGAGCATCAGTGGCAGCAGCATGGAGACCGTCGCCGCCTTCTACGAGCAGCGGAGACTTTTACACAAGATCAACGCGGAGAAGCACCCCGAGGAAGTGTTCCAGCAGGTGTGCCAGGTGCTGGACTCCCACTAGAGGTCCGGCTCAGACAGAGCAGTGCCGCCTCCGGGAGGAAGGCCGTCCGAGAGCCGCCACGCGGGCACCGTCCACACGGGGACCCACGCACCTGATCACCGCTGCTCGCCCAAGCCAACGACGCTTCAGAAGACTAGTGTCACATATTTTGGAAAGTAATGCATGTCTGCGCTCACTCCTAGGAACTCCGCATTCTAACCAAGACTCCAGCGATGTGTTGCACTACAGTGGTGAAAACAATGACCGTTAATGTCGTCGTCGTCATCGTCATTCGATTCGTAAGGTTCCTTCATCACTAAGCCAACCCTGCCATCACCTCCCACTGCCCCCGAAACAAGAGCATCAGTGCAGCCTAATGTGTGTCAAGTATCGCATCCATCACAACCACGCTGCTTCAAACACGCAAGTGAGAACTGAATAAAATGGGTCCGAGTGTGGCTTCACAAAGACTAACACAAATGTCAAACTATGTCAGACTGCTTTTAGGCACCAGTATCGGTAACTGTTGATAATTGTTGCCAGTCCAGCTTTGCTGCAGTTTTGATGCATGAACAGCGCTAAGTGTCACAAGTAAACTTTACACTTTTTGTGTTATATAAACTTCTTTATGAAatgacagatatatatatatatatatccatgt

Function

GO:

id name namespace
GO:0044237 cellular metabolic process biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004997 True 1432 mRNA 0.53 8 11412899 11438182

Neighbor

gene id symbol gene type direction distance location
AMCG00004972 NA coding downstream 51346 11343332 ~ 11361553 (-)
AMCG00004973 NA coding downstream 73289 11329243 ~ 11339610 (-)
AMCG00004971 gipc2,dnajb4,LOC108430720 coding downstream 103656 11282626 ~ 11309243 (-)
AMCG00004960 NA coding downstream 150068 11254762 ~ 11262831 (-)
AMCG00004963 bt3l4,btf3l4,LOC107655993,LOC105028135,LOC103026176,LOC107562065 coding downstream 165145 11244611 ~ 11247754 (-)
AMCG00004999 ak5,LOC102787869 coding upstream 13560 11451742 ~ 11462502 (-)
AMCG00004998 st6galnac5,LOC103370426 coding upstream 72038 11510220 ~ 11525189 (-)
AMCG00004994 st6galnac3 coding upstream 138888 11577070 ~ 11580186 (-)
AMCG00005003 st6galnac3,LOC106569362,LOC107735094 coding upstream 165412 11603594 ~ 11619275 (-)
AMCG00005000 acadm,LOC107674066,LOC107602542,LOC107688505,LOC107584839 coding upstream 231238 11669420 ~ 11681466 (-)
G144614 NA non-coding downstream 84418 11322583 ~ 11328481 (-)
G144612 fubp1 non-coding downstream 90893 11319126 ~ 11322006 (-)
G144587 NA non-coding downstream 158325 11253615 ~ 11254574 (-)
G144502 NA non-coding downstream 454898 10956085 ~ 10958001 (-)
G144353 NA non-coding downstream 1474288 9937980 ~ 9938611 (-)
G144657 NA non-coding upstream 60990 11499172 ~ 11501075 (-)
G144659 NA non-coding upstream 67496 11505678 ~ 11506002 (-)
G144672 NA non-coding upstream 133008 11571190 ~ 11572410 (-)
G144821 NA non-coding upstream 571736 12009918 ~ 12010371 (-)
G144826 NA non-coding upstream 585332 12023514 ~ 12029449 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 2506305 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 2565124 8836360 ~ 8847775 (-)
G144050 selenof,LOC106598901 other downstream 3035898 8353989 ~ 8377001 (-)
G143659 NA other downstream 5629715 5736809 ~ 5783184 (-)
AMCG00004819 zbtb37,LOC106613586 other downstream 7296485 4109082 ~ 4116414 (-)
AMCG00005011 best4,LOC103396708 other upstream 697196 12135378 ~ 12156378 (-)
AMCG00005022 NA other upstream 906489 12344671 ~ 12348328 (-)
G145046 NA other upstream 1898027 13336209 ~ 13336746 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 3526232 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 4064900 15503082 ~ 15535145 (-)

Expression


Co-expression Network