AMCG00005042


Basic Information

Item Value
gene id AMCG00005042
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 13366931 ~ 13367263 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005042
ATGAGTAAAGAGGTATTGGAGTTTTTCAATGACCTGTGGAGCATCGCCACCGCCAAGCAAGATCAAGGGATTTACAACACCGTGTGTCTGGTGGTCTTGCTAGCCCTGCCCCTGGTGGTCCTCTTCACCTCGCTGGTGGTGTGctgtcactgctgctgctgccggcGGACTGGCTGTTGCTCGTGCTGCGCCTGCTGTGAAGGGAATGAGAAGCAGGGCAGTGCAAAGACggacaaaaagaagaagaagaaacccCTCAAAAACGAAGACCTTTGGATTTCTGTCAAACCGGGGCCGATGACCCCGGAGAGAATGGCACTCACAATGGTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005042 True 333 mRNA 0.54 1 13366931 13367263

Neighbor

gene id symbol gene type direction distance location
AMCG00005036 mrps14,LOC107658361 coding downstream 49079 13315390 ~ 13317852 (-)
AMCG00005039 NA coding downstream 53354 13309544 ~ 13313577 (-)
AMCG00005037 NA coding downstream 59971 13301123 ~ 13306960 (-)
AMCG00005041 NA coding downstream 71512 13263243 ~ 13295419 (-)
AMCG00005040 NA coding downstream 104063 13260215 ~ 13262868 (-)
AMCG00005048 NA coding upstream 24446 13391709 ~ 13429286 (-)
AMCG00005045 rfwd2 coding upstream 214198 13581461 ~ 13601804 (-)
AMCG00005044 LOC100380755 coding upstream 305480 13672743 ~ 13684709 (-)
AMCG00005049 astn1 coding upstream 337963 13705226 ~ 13710482 (-)
AMCG00005047 astn1 coding upstream 372191 13739454 ~ 13744629 (-)
G145031 NA non-coding downstream 108070 13257922 ~ 13258861 (-)
G144954 NA non-coding downstream 551413 12812977 ~ 12815518 (-)
G144941 NA non-coding downstream 585761 12780573 ~ 12781170 (-)
G144920 NA non-coding downstream 750981 12615715 ~ 12615950 (-)
G144893 NA non-coding downstream 998463 12367423 ~ 12368468 (-)
G145129 NA non-coding upstream 694458 14061721 ~ 14062111 (-)
G145130 NA non-coding upstream 695081 14062344 ~ 14062624 (-)
G145131 NA non-coding upstream 695602 14062865 ~ 14063123 (-)
G145138 NA non-coding upstream 790317 14157580 ~ 14161976 (-)
G145146 NA non-coding upstream 812841 14180104 ~ 14183513 (-)
G145046 NA other downstream 30185 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 1018603 12344671 ~ 12348328 (-)
AMCG00005011 best4,LOC103396708 other downstream 1210553 12135378 ~ 12156378 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 4460337 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 4519156 8836360 ~ 8847775 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 1597151 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 2135819 15503082 ~ 15535145 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other upstream 2591441 15958704 ~ 15978855 (-)
AMCG00005158 NA other upstream 4175883 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 5374621 18741884 ~ 18764298 (-)

Expression


Co-expression Network